Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TTC9BQ8N6N2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
TTC9BQ8N6N2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
TTC9BQ8N6N2 AL359258.2-201ENST00000564063 1566 ntBASIC26.46■■□□□ 1.83
TTC9BQ8N6N2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.46■■□□□ 1.83
TTC9BQ8N6N2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TTC9BQ8N6N2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.46■■□□□ 1.83
TTC9BQ8N6N2 ECEL1P2-201ENST00000461596 1295 ntBASIC26.46■■□□□ 1.83
TTC9BQ8N6N2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
TTC9BQ8N6N2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
TTC9BQ8N6N2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.45■■□□□ 1.83
TTC9BQ8N6N2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TTC9BQ8N6N2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
TTC9BQ8N6N2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
TTC9BQ8N6N2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
TTC9BQ8N6N2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.45■■□□□ 1.82
TTC9BQ8N6N2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
TTC9BQ8N6N2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TTC9BQ8N6N2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.44■■□□□ 1.82
TTC9BQ8N6N2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.44■■□□□ 1.82
TTC9BQ8N6N2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TTC9BQ8N6N2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.44■■□□□ 1.82
TTC9BQ8N6N2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TTC9BQ8N6N2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
TTC9BQ8N6N2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.43■■□□□ 1.82
TTC9BQ8N6N2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TTC9BQ8N6N2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TTC9BQ8N6N2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TTC9BQ8N6N2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TTC9BQ8N6N2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
TTC9BQ8N6N2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TTC9BQ8N6N2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.4■■□□□ 1.82
TTC9BQ8N6N2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
TTC9BQ8N6N2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.39■■□□□ 1.82
TTC9BQ8N6N2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.39■■□□□ 1.81
TTC9BQ8N6N2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TTC9BQ8N6N2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TTC9BQ8N6N2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
TTC9BQ8N6N2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.37■■□□□ 1.81
TTC9BQ8N6N2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TTC9BQ8N6N2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TTC9BQ8N6N2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TTC9BQ8N6N2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TTC9BQ8N6N2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TTC9BQ8N6N2 AC018358.1-201ENST00000631079 1402 ntBASIC26.36■■□□□ 1.81
TTC9BQ8N6N2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TTC9BQ8N6N2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
TTC9BQ8N6N2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TTC9BQ8N6N2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TTC9BQ8N6N2 AC012354.3-201ENST00000623734 483 ntBASIC26.35■■□□□ 1.81
TTC9BQ8N6N2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TTC9BQ8N6N2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TTC9BQ8N6N2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TTC9BQ8N6N2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC9BQ8N6N2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC9BQ8N6N2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TTC9BQ8N6N2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TTC9BQ8N6N2 DRD5P2-201ENST00000421395 2012 ntBASIC26.34■■□□□ 1.81
TTC9BQ8N6N2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC9BQ8N6N2 KRT18P60-201ENST00000312876 1297 ntBASIC26.33■■□□□ 1.81
TTC9BQ8N6N2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TTC9BQ8N6N2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.33■■□□□ 1.81
TTC9BQ8N6N2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
TTC9BQ8N6N2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
TTC9BQ8N6N2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
TTC9BQ8N6N2 AC007029.1-201ENST00000604183 313 ntBASIC26.32■■□□□ 1.8
TTC9BQ8N6N2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.32■■□□□ 1.8
TTC9BQ8N6N2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TTC9BQ8N6N2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TTC9BQ8N6N2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TTC9BQ8N6N2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TTC9BQ8N6N2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.31■■□□□ 1.8
TTC9BQ8N6N2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TTC9BQ8N6N2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
TTC9BQ8N6N2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
TTC9BQ8N6N2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TTC9BQ8N6N2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.29■■□□□ 1.8
TTC9BQ8N6N2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TTC9BQ8N6N2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.29■■□□□ 1.8
TTC9BQ8N6N2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC9BQ8N6N2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TTC9BQ8N6N2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.28■■□□□ 1.8
TTC9BQ8N6N2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
TTC9BQ8N6N2 SMPD5-203ENST00000639008 1464 ntBASIC26.27■■□□□ 1.8
TTC9BQ8N6N2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.26■■□□□ 1.79
TTC9BQ8N6N2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.26■■□□□ 1.79
TTC9BQ8N6N2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TTC9BQ8N6N2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.26■■□□□ 1.79
TTC9BQ8N6N2 AL033527.3-201ENST00000566366 1196 ntBASIC26.26■■□□□ 1.79
TTC9BQ8N6N2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TTC9BQ8N6N2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
TTC9BQ8N6N2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
TTC9BQ8N6N2 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.25■■□□□ 1.79
TTC9BQ8N6N2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.25■■□□□ 1.79
TTC9BQ8N6N2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TTC9BQ8N6N2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
TTC9BQ8N6N2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.25■■□□□ 1.79
TTC9BQ8N6N2 AC025884.2-201ENST00000553429 711 ntBASIC26.25■■□□□ 1.79
TTC9BQ8N6N2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.24■■□□□ 1.79
TTC9BQ8N6N2 AC009831.1-201ENST00000580420 1582 ntBASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms