Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf42Q8N5U0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.63■□□□□ 0.89
C11orf42Q8N5U0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf42Q8N5U0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C11orf42Q8N5U0 LINC01003-201ENST00000564834 1764 ntBASIC20.62■□□□□ 0.89
C11orf42Q8N5U0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C11orf42Q8N5U0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.62■□□□□ 0.89
C11orf42Q8N5U0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C11orf42Q8N5U0 MIR219A2-201ENST00000608502 1504 ntBASIC20.62■□□□□ 0.89
C11orf42Q8N5U0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
C11orf42Q8N5U0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C11orf42Q8N5U0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
C11orf42Q8N5U0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf42Q8N5U0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf42Q8N5U0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf42Q8N5U0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
C11orf42Q8N5U0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf42Q8N5U0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.59■□□□□ 0.89
C11orf42Q8N5U0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf42Q8N5U0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf42Q8N5U0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
C11orf42Q8N5U0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
C11orf42Q8N5U0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
C11orf42Q8N5U0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
C11orf42Q8N5U0 BX255925.1-201ENST00000566954 1854 ntBASIC20.58■□□□□ 0.88
C11orf42Q8N5U0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.58■□□□□ 0.88
C11orf42Q8N5U0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.58■□□□□ 0.88
C11orf42Q8N5U0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf42Q8N5U0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.57■□□□□ 0.88
C11orf42Q8N5U0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf42Q8N5U0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf42Q8N5U0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf42Q8N5U0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.56■□□□□ 0.88
C11orf42Q8N5U0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.56■□□□□ 0.88
C11orf42Q8N5U0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf42Q8N5U0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf42Q8N5U0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf42Q8N5U0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf42Q8N5U0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf42Q8N5U0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf42Q8N5U0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf42Q8N5U0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf42Q8N5U0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf42Q8N5U0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf42Q8N5U0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf42Q8N5U0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf42Q8N5U0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf42Q8N5U0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf42Q8N5U0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf42Q8N5U0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf42Q8N5U0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf42Q8N5U0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf42Q8N5U0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf42Q8N5U0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
C11orf42Q8N5U0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf42Q8N5U0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf42Q8N5U0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
C11orf42Q8N5U0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf42Q8N5U0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.54■□□□□ 0.88
C11orf42Q8N5U0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.54■□□□□ 0.88
C11orf42Q8N5U0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.54■□□□□ 0.88
C11orf42Q8N5U0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf42Q8N5U0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf42Q8N5U0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
C11orf42Q8N5U0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.53■□□□□ 0.88
C11orf42Q8N5U0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf42Q8N5U0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
C11orf42Q8N5U0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
C11orf42Q8N5U0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf42Q8N5U0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C11orf42Q8N5U0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
C11orf42Q8N5U0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C11orf42Q8N5U0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
C11orf42Q8N5U0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.52■□□□□ 0.88
C11orf42Q8N5U0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
C11orf42Q8N5U0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C11orf42Q8N5U0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C11orf42Q8N5U0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.51■□□□□ 0.87
C11orf42Q8N5U0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.51■□□□□ 0.87
C11orf42Q8N5U0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C11orf42Q8N5U0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C11orf42Q8N5U0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
C11orf42Q8N5U0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
C11orf42Q8N5U0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C11orf42Q8N5U0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
C11orf42Q8N5U0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C11orf42Q8N5U0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C11orf42Q8N5U0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
C11orf42Q8N5U0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
C11orf42Q8N5U0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf42Q8N5U0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf42Q8N5U0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.48■□□□□ 0.87
C11orf42Q8N5U0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf42Q8N5U0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
C11orf42Q8N5U0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf42Q8N5U0 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.48■□□□□ 0.87
C11orf42Q8N5U0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf42Q8N5U0 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.48■□□□□ 0.87
C11orf42Q8N5U0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
C11orf42Q8N5U0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms