Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 SPCS2P3-201ENST00000500401 656 ntBASIC30.28■■■□□ 2.44
USP50Q70EL3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
USP50Q70EL3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC30.27■■■□□ 2.44
USP50Q70EL3 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.27■■■□□ 2.44
USP50Q70EL3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.27■■■□□ 2.44
USP50Q70EL3 AC139795.1-202ENST00000500444 432 ntBASIC30.26■■■□□ 2.43
USP50Q70EL3 AL359258.2-201ENST00000564063 1566 ntBASIC30.26■■■□□ 2.43
USP50Q70EL3 RAP2CP1-202ENST00000605179 643 ntBASIC30.26■■■□□ 2.43
USP50Q70EL3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.26■■■□□ 2.43
USP50Q70EL3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
USP50Q70EL3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC30.24■■■□□ 2.43
USP50Q70EL3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC30.24■■■□□ 2.43
USP50Q70EL3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
USP50Q70EL3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
USP50Q70EL3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
USP50Q70EL3 AC093536.1-201ENST00000569153 554 ntBASIC30.23■■■□□ 2.43
USP50Q70EL3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
USP50Q70EL3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
USP50Q70EL3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC30.22■■■□□ 2.43
USP50Q70EL3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
USP50Q70EL3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.22■■■□□ 2.43
USP50Q70EL3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
USP50Q70EL3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC30.22■■■□□ 2.43
USP50Q70EL3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
USP50Q70EL3 MIR6765-201ENST00000614092 87 ntBASIC30.21■■■□□ 2.43
USP50Q70EL3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.21■■■□□ 2.43
USP50Q70EL3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC30.2■■■□□ 2.43
USP50Q70EL3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.2■■■□□ 2.43
USP50Q70EL3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
USP50Q70EL3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.2■■■□□ 2.43
USP50Q70EL3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
USP50Q70EL3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
USP50Q70EL3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.42
USP50Q70EL3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
USP50Q70EL3 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
USP50Q70EL3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
USP50Q70EL3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
USP50Q70EL3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
USP50Q70EL3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
USP50Q70EL3 HYI-210ENST00000486909 905 ntTSL 5 BASIC30.19■■■□□ 2.42
USP50Q70EL3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.19■■■□□ 2.42
USP50Q70EL3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
USP50Q70EL3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
USP50Q70EL3 PVT1_1.1-201ENST00000615125 194 ntBASIC30.18■■■□□ 2.42
USP50Q70EL3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
USP50Q70EL3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
USP50Q70EL3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
USP50Q70EL3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
USP50Q70EL3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
USP50Q70EL3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
USP50Q70EL3 MIR4508-201ENST00000584178 70 ntBASIC30.16■■■□□ 2.42
USP50Q70EL3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC30.16■■■□□ 2.42
USP50Q70EL3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.15■■■□□ 2.42
USP50Q70EL3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.15■■■□□ 2.42
USP50Q70EL3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC30.15■■■□□ 2.42
USP50Q70EL3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
USP50Q70EL3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
USP50Q70EL3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC30.14■■■□□ 2.42
USP50Q70EL3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.14■■■□□ 2.42
USP50Q70EL3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
USP50Q70EL3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.13■■■□□ 2.41
USP50Q70EL3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.13■■■□□ 2.41
USP50Q70EL3 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.12■■■□□ 2.41
USP50Q70EL3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC30.12■■■□□ 2.41
USP50Q70EL3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.12■■■□□ 2.41
USP50Q70EL3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.12■■■□□ 2.41
USP50Q70EL3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
USP50Q70EL3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.11■■■□□ 2.41
USP50Q70EL3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
USP50Q70EL3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
USP50Q70EL3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
USP50Q70EL3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
USP50Q70EL3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
USP50Q70EL3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
USP50Q70EL3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.1■■■□□ 2.41
USP50Q70EL3 AL356441.2-201ENST00000443009 864 ntBASIC30.1■■■□□ 2.41
USP50Q70EL3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.1■■■□□ 2.41
USP50Q70EL3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC30.1■■■□□ 2.41
USP50Q70EL3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.09■■■□□ 2.41
USP50Q70EL3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
USP50Q70EL3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
USP50Q70EL3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
USP50Q70EL3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC30.09■■■□□ 2.41
USP50Q70EL3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
USP50Q70EL3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC30.09■■■□□ 2.41
USP50Q70EL3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
USP50Q70EL3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
USP50Q70EL3 AC018755.3-202ENST00000596210 929 ntBASIC30.09■■■□□ 2.41
USP50Q70EL3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC30.09■■■□□ 2.41
USP50Q70EL3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
USP50Q70EL3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC30.08■■■□□ 2.41
USP50Q70EL3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.08■■■□□ 2.41
USP50Q70EL3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.08■■■□□ 2.41
USP50Q70EL3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
USP50Q70EL3 MIR3960-201ENST00000583311 91 ntBASIC30.08■■■□□ 2.41
USP50Q70EL3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
USP50Q70EL3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
USP50Q70EL3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC30.07■■■□□ 2.4
USP50Q70EL3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC30.07■■■□□ 2.4
USP50Q70EL3 MIR935-201ENST00000401179 91 ntBASIC30.06■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms