Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
RSPO4Q2I0M5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
RSPO4Q2I0M5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
RSPO4Q2I0M5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
RSPO4Q2I0M5 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.69■■□□□ 1.54
RSPO4Q2I0M5 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.68■■□□□ 1.54
RSPO4Q2I0M5 AC239859.2-201ENST00000444165 318 ntBASIC24.68■■□□□ 1.54
RSPO4Q2I0M5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RSPO4Q2I0M5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RSPO4Q2I0M5 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.67■■□□□ 1.54
RSPO4Q2I0M5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.67■■□□□ 1.54
RSPO4Q2I0M5 AC103724.3-201ENST00000564481 992 ntBASIC24.67■■□□□ 1.54
RSPO4Q2I0M5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RSPO4Q2I0M5 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RSPO4Q2I0M5 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RSPO4Q2I0M5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RSPO4Q2I0M5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.66■■□□□ 1.54
RSPO4Q2I0M5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.66■■□□□ 1.54
RSPO4Q2I0M5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RSPO4Q2I0M5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RSPO4Q2I0M5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
RSPO4Q2I0M5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.65■■□□□ 1.54
RSPO4Q2I0M5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.65■■□□□ 1.54
RSPO4Q2I0M5 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.65■■□□□ 1.54
RSPO4Q2I0M5 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RSPO4Q2I0M5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.64■■□□□ 1.54
RSPO4Q2I0M5 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RSPO4Q2I0M5 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RSPO4Q2I0M5 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RSPO4Q2I0M5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.63■■□□□ 1.53
RSPO4Q2I0M5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
RSPO4Q2I0M5 AC120057.4-201ENST00000624722 1615 ntBASIC24.63■■□□□ 1.53
RSPO4Q2I0M5 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RSPO4Q2I0M5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RSPO4Q2I0M5 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RSPO4Q2I0M5 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RSPO4Q2I0M5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.62■■□□□ 1.53
RSPO4Q2I0M5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RSPO4Q2I0M5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
RSPO4Q2I0M5 AL161658.1-201ENST00000623641 1967 ntBASIC24.61■■□□□ 1.53
RSPO4Q2I0M5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.61■■□□□ 1.53
RSPO4Q2I0M5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.61■■□□□ 1.53
RSPO4Q2I0M5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RSPO4Q2I0M5 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
RSPO4Q2I0M5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.6■■□□□ 1.53
RSPO4Q2I0M5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
RSPO4Q2I0M5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.59■■□□□ 1.53
RSPO4Q2I0M5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.59■■□□□ 1.53
RSPO4Q2I0M5 AC093536.1-201ENST00000569153 554 ntBASIC24.59■■□□□ 1.53
RSPO4Q2I0M5 RAP2CP1-202ENST00000605179 643 ntBASIC24.59■■□□□ 1.53
RSPO4Q2I0M5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.59■■□□□ 1.53
RSPO4Q2I0M5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.58■■□□□ 1.53
RSPO4Q2I0M5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RSPO4Q2I0M5 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RSPO4Q2I0M5 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RSPO4Q2I0M5 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.57■■□□□ 1.52
RSPO4Q2I0M5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RSPO4Q2I0M5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.56■■□□□ 1.52
RSPO4Q2I0M5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
RSPO4Q2I0M5 AC018755.3-202ENST00000596210 929 ntBASIC24.56■■□□□ 1.52
RSPO4Q2I0M5 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.56■■□□□ 1.52
RSPO4Q2I0M5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
RSPO4Q2I0M5 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RSPO4Q2I0M5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RSPO4Q2I0M5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RSPO4Q2I0M5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.55■■□□□ 1.52
RSPO4Q2I0M5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RSPO4Q2I0M5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.55■■□□□ 1.52
RSPO4Q2I0M5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.55■■□□□ 1.52
RSPO4Q2I0M5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RSPO4Q2I0M5 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
RSPO4Q2I0M5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.54■■□□□ 1.52
RSPO4Q2I0M5 AL139246.5-201ENST00000606645 996 ntBASIC24.54■■□□□ 1.52
RSPO4Q2I0M5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RSPO4Q2I0M5 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.54■■□□□ 1.52
RSPO4Q2I0M5 AC092666.2-201ENST00000613287 246 ntBASIC24.53■■□□□ 1.52
RSPO4Q2I0M5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RSPO4Q2I0M5 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RSPO4Q2I0M5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
RSPO4Q2I0M5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RSPO4Q2I0M5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.51■■□□□ 1.51
RSPO4Q2I0M5 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.51■■□□□ 1.51
RSPO4Q2I0M5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.51■■□□□ 1.51
RSPO4Q2I0M5 Z92544.1-202ENST00000571933 1220 ntBASIC24.51■■□□□ 1.51
RSPO4Q2I0M5 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.51■■□□□ 1.51
RSPO4Q2I0M5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RSPO4Q2I0M5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.5■■□□□ 1.51
RSPO4Q2I0M5 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RSPO4Q2I0M5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RSPO4Q2I0M5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.49■■□□□ 1.51
RSPO4Q2I0M5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RSPO4Q2I0M5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RSPO4Q2I0M5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.49■■□□□ 1.51
RSPO4Q2I0M5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RSPO4Q2I0M5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.48■■□□□ 1.51
RSPO4Q2I0M5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.48■■□□□ 1.51
RSPO4Q2I0M5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RSPO4Q2I0M5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RSPO4Q2I0M5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RSPO4Q2I0M5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms