Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.34■■■□□ 2.45
PDS5AQ29RF7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
PDS5AQ29RF7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.33■■■□□ 2.45
PDS5AQ29RF7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
PDS5AQ29RF7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
PDS5AQ29RF7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
PDS5AQ29RF7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
PDS5AQ29RF7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PDS5AQ29RF7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC30.32■■■□□ 2.44
PDS5AQ29RF7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
PDS5AQ29RF7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PDS5AQ29RF7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.31■■■□□ 2.44
PDS5AQ29RF7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
PDS5AQ29RF7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PDS5AQ29RF7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
PDS5AQ29RF7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.29■■■□□ 2.44
PDS5AQ29RF7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PDS5AQ29RF7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PDS5AQ29RF7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC30.28■■■□□ 2.44
PDS5AQ29RF7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
PDS5AQ29RF7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
PDS5AQ29RF7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
PDS5AQ29RF7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PDS5AQ29RF7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.27■■■□□ 2.44
PDS5AQ29RF7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
PDS5AQ29RF7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
PDS5AQ29RF7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PDS5AQ29RF7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PDS5AQ29RF7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PDS5AQ29RF7 U85056.1-201ENST00000616429 682 ntBASIC30.25■■■□□ 2.43
PDS5AQ29RF7 REST-210ENST00000638187 1334 ntTSL 5 BASIC30.25■■■□□ 2.43
PDS5AQ29RF7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
PDS5AQ29RF7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
PDS5AQ29RF7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
PDS5AQ29RF7 AC025884.2-201ENST00000553429 711 ntBASIC30.24■■■□□ 2.43
PDS5AQ29RF7 AC007029.1-201ENST00000604183 313 ntBASIC30.24■■■□□ 2.43
PDS5AQ29RF7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
PDS5AQ29RF7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
PDS5AQ29RF7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
PDS5AQ29RF7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.23■■■□□ 2.43
PDS5AQ29RF7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC30.22■■■□□ 2.43
PDS5AQ29RF7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PDS5AQ29RF7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PDS5AQ29RF7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC30.22■■■□□ 2.43
PDS5AQ29RF7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PDS5AQ29RF7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
PDS5AQ29RF7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.21■■■□□ 2.43
PDS5AQ29RF7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
PDS5AQ29RF7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.21■■■□□ 2.43
PDS5AQ29RF7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
PDS5AQ29RF7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC30.21■■■□□ 2.43
PDS5AQ29RF7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
PDS5AQ29RF7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
PDS5AQ29RF7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
PDS5AQ29RF7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC30.2■■■□□ 2.42
PDS5AQ29RF7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.42
PDS5AQ29RF7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.2■■■□□ 2.42
PDS5AQ29RF7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.19■■■□□ 2.42
PDS5AQ29RF7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
PDS5AQ29RF7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
PDS5AQ29RF7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
PDS5AQ29RF7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
PDS5AQ29RF7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PDS5AQ29RF7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.18■■■□□ 2.42
PDS5AQ29RF7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PDS5AQ29RF7 DRD5P2-201ENST00000421395 2012 ntBASIC30.17■■■□□ 2.42
PDS5AQ29RF7 SMPD5-203ENST00000639008 1464 ntBASIC30.17■■■□□ 2.42
PDS5AQ29RF7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC30.17■■■□□ 2.42
PDS5AQ29RF7 AC012354.3-201ENST00000623734 483 ntBASIC30.16■■■□□ 2.42
PDS5AQ29RF7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.16■■■□□ 2.42
PDS5AQ29RF7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
PDS5AQ29RF7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
PDS5AQ29RF7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
PDS5AQ29RF7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.15■■■□□ 2.42
PDS5AQ29RF7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.42
PDS5AQ29RF7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.14■■■□□ 2.42
PDS5AQ29RF7 GFER-205ENST00000569451 517 ntTSL 5 BASIC30.14■■■□□ 2.42
PDS5AQ29RF7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.14■■■□□ 2.42
PDS5AQ29RF7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PDS5AQ29RF7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
PDS5AQ29RF7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC30.13■■■□□ 2.41
PDS5AQ29RF7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PDS5AQ29RF7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PDS5AQ29RF7 KRT18P60-201ENST00000312876 1297 ntBASIC30.12■■■□□ 2.41
PDS5AQ29RF7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PDS5AQ29RF7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
PDS5AQ29RF7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.11■■■□□ 2.41
PDS5AQ29RF7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PDS5AQ29RF7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
PDS5AQ29RF7 WHAMMP3-201ENST00000611636 1609 ntBASIC30.1■■■□□ 2.41
PDS5AQ29RF7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
PDS5AQ29RF7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.09■■■□□ 2.41
PDS5AQ29RF7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.09■■■□□ 2.41
PDS5AQ29RF7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
PDS5AQ29RF7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PDS5AQ29RF7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PDS5AQ29RF7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PDS5AQ29RF7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PDS5AQ29RF7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
PDS5AQ29RF7 AC009831.1-201ENST00000580420 1582 ntBASIC30.07■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 209.1 ms