Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 CDC23YHR166C 1881 nt7.17□□□□□ -1.26
RPN9Q04062 YPQ1YOL092W 927 nt7.17□□□□□ -1.26
RPN9Q04062 UME1YPL139C 1383 nt7.17□□□□□ -1.26
RPN9Q04062 SUF3tG(CCC)D 72 nt7.16□□□□□ -1.26
RPN9Q04062 RTC4YNL254C 1206 nt7.16□□□□□ -1.26
RPN9Q04062 POB3YML069W 1659 nt7.16□□□□□ -1.26
RPN9Q04062 MHP1YJL042W 4197 nt7.15□□□□□ -1.26
RPN9Q04062 PET117YER058W 324 nt7.14□□□□□ -1.27
RPN9Q04062 YAL019W-AYAL019W-A 570 nt7.14□□□□□ -1.27
RPN9Q04062 YMR074CYMR074C 438 nt7.14□□□□□ -1.27
RPN9Q04062 LAT1YNL071W 1449 nt7.14□□□□□ -1.27
RPN9Q04062 RDR1YOR380W 1641 nt7.14□□□□□ -1.27
RPN9Q04062 NFS1YCL017C 1494 nt7.14□□□□□ -1.27
RPN9Q04062 LIP5YOR196C 1245 nt7.13□□□□□ -1.27
RPN9Q04062 SDH8YBR269C 417 nt7.13□□□□□ -1.27
RPN9Q04062 ACO1YLR304C 2337 nt7.13□□□□□ -1.27
RPN9Q04062 FLC2YAL053W 2352 nt7.12□□□□□ -1.27
RPN9Q04062 MBF1YOR298C-A 456 nt7.12□□□□□ -1.27
RPN9Q04062 CST26YBR042C 1194 nt7.12□□□□□ -1.27
RPN9Q04062 DML1YMR211W 1428 nt7.11□□□□□ -1.27
RPN9Q04062 PRS4YBL068W 981 nt7.11□□□□□ -1.27
RPN9Q04062 EDC3YEL015W 1656 nt7.11□□□□□ -1.27
RPN9Q04062 ICL2YPR006C 1728 nt7.1□□□□□ -1.27
RPN9Q04062 SMC5YOL034W 3282 nt7.1□□□□□ -1.27
RPN9Q04062 DPM1YPR183W 804 nt7.1□□□□□ -1.27
RPN9Q04062 NAF1YNL124W 1479 nt7.1□□□□□ -1.27
RPN9Q04062 TUB1YML085C 1344 nt7.09□□□□□ -1.27
RPN9Q04062 CDC7YDL017W 1524 nt7.09□□□□□ -1.27
RPN9Q04062 CAN1YEL063C 1773 nt7.08□□□□□ -1.28
RPN9Q04062 PGI1YBR196C 1665 nt7.08□□□□□ -1.28
RPN9Q04062 HOG1YLR113W 1308 nt7.07□□□□□ -1.28
RPN9Q04062 DMC1YER179W 1005 nt7.07□□□□□ -1.28
RPN9Q04062 TRR2YHR106W 1029 nt7.07□□□□□ -1.28
RPN9Q04062 ERG27YLR100W 1044 nt7.07□□□□□ -1.28
RPN9Q04062 YOX1YML027W 1158 nt7.07□□□□□ -1.28
RPN9Q04062 RPL43AYPR043W 279 nt7.07□□□□□ -1.28
RPN9Q04062 YKR018CYKR018C 2178 nt7.07□□□□□ -1.28
RPN9Q04062 YPL247CYPL247C 1572 nt7.07□□□□□ -1.28
RPN9Q04062 TOS2YGR221C 1869 nt7.07□□□□□ -1.28
RPN9Q04062 MPE1YKL059C 1326 nt7.06□□□□□ -1.28
RPN9Q04062 CYS3YAL012W 1185 nt7.06□□□□□ -1.28
RPN9Q04062 SEC24YIL109C 2781 nt7.06□□□□□ -1.28
RPN9Q04062 snR30snR30 606 nt7.05□□□□□ -1.28
RPN9Q04062 UBP13YBL067C 2244 nt7.04□□□□□ -1.28
RPN9Q04062 ENB1YOL158C 1821 nt7.04□□□□□ -1.28
RPN9Q04062 SUN4YNL066W 1263 nt7.04□□□□□ -1.28
RPN9Q04062 FCY2YER056C 1602 nt7.04□□□□□ -1.28
RPN9Q04062 NUP57YGR119C 1626 nt7.03□□□□□ -1.28
RPN9Q04062 PDA1YER178W 1263 nt7.03□□□□□ -1.28
RPN9Q04062 GET4YOR164C 939 nt7.03□□□□□ -1.28
RPN9Q04062 PHO85YPL031C 918 nt7.03□□□□□ -1.28
RPN9Q04062 PPS1YBR276C 2424 nt7.03□□□□□ -1.28
RPN9Q04062 YKR023WYKR023W 1593 nt7.03□□□□□ -1.28
RPN9Q04062 PRB1YEL060C 1908 nt7.02□□□□□ -1.29
RPN9Q04062 SSC1YJR045C 1965 nt7.02□□□□□ -1.29
RPN9Q04062 HSM3YBR272C 1443 nt7.01□□□□□ -1.29
RPN9Q04062 PLB2YMR006C 2121 nt7.01□□□□□ -1.29
RPN9Q04062 RMD8YFR048W 1989 nt7.01□□□□□ -1.29
RPN9Q04062 VTS1YOR359W 1572 nt7.01□□□□□ -1.29
RPN9Q04062 YPR130CYPR130C 408 nt7.01□□□□□ -1.29
RPN9Q04062 YCL049CYCL049C 939 nt7.01□□□□□ -1.29
RPN9Q04062 TRR1YDR353W 960 nt7□□□□□ -1.29
RPN9Q04062 LOT6YLR011W 576 nt7□□□□□ -1.29
RPN9Q04062 YOR389WYOR389W 1875 nt7□□□□□ -1.29
RPN9Q04062 TOD6YBL054W 1578 nt6.99□□□□□ -1.29
RPN9Q04062 YPR127WYPR127W 1038 nt6.99□□□□□ -1.29
RPN9Q04062 EXG2YDR261C 1689 nt6.99□□□□□ -1.29
RPN9Q04062 AGP2YBR132C 1791 nt6.98□□□□□ -1.29
RPN9Q04062 HTZ1YOL012C 405 nt6.98□□□□□ -1.29
RPN9Q04062 BNA3YJL060W 1335 nt6.98□□□□□ -1.29
RPN9Q04062 APE4YHR113W 1473 nt6.98□□□□□ -1.29
RPN9Q04062 CIA1YDR267C 993 nt6.97□□□□□ -1.29
RPN9Q04062 AIM46YHR199C 933 nt6.97□□□□□ -1.29
RPN9Q04062 SML1YML058W 315 nt6.97□□□□□ -1.29
RPN9Q04062 COS10YNR075W 1125 nt6.97□□□□□ -1.29
RPN9Q04062 BRN1YBL097W 2265 nt6.97□□□□□ -1.29
RPN9Q04062 NMD5YJR132W 3147 nt6.96□□□□□ -1.3
RPN9Q04062 YLR162WYLR162W 357 nt6.96□□□□□ -1.3
RPN9Q04062 ZIM17YNL310C 525 nt6.96□□□□□ -1.3
RPN9Q04062 YNR001W-AYNR001W-A 219 nt6.96□□□□□ -1.3
RPN9Q04062 YPL041CYPL041C 624 nt6.96□□□□□ -1.3
RPN9Q04062 YCR049CYCR049C 447 nt6.95□□□□□ -1.3
RPN9Q04062 THR1YHR025W 1074 nt6.95□□□□□ -1.3
RPN9Q04062 YAL045CYAL045C 309 nt6.95□□□□□ -1.3
RPN9Q04062 MCP1YOR228C 909 nt6.95□□□□□ -1.3
RPN9Q04062 HDA1YNL021W 2121 nt6.95□□□□□ -1.3
RPN9Q04062 NUP84YDL116W 2181 nt6.95□□□□□ -1.3
RPN9Q04062 YER137CYER137C 447 nt6.94□□□□□ -1.3
RPN9Q04062 URA1YKL216W 945 nt6.94□□□□□ -1.3
RPN9Q04062 AAD14YNL331C 1131 nt6.94□□□□□ -1.3
RPN9Q04062 ADE17YMR120C 1779 nt6.94□□□□□ -1.3
RPN9Q04062 PRP2YNR011C 2631 nt6.93□□□□□ -1.3
RPN9Q04062 YCR041WYCR041W 333 nt6.93□□□□□ -1.3
RPN9Q04062 YNR005CYNR005C 405 nt6.93□□□□□ -1.3
RPN9Q04062 NTG2YOL043C 1143 nt6.93□□□□□ -1.3
RPN9Q04062 ERG10YPL028W 1197 nt6.93□□□□□ -1.3
RPN9Q04062 MSG5YNL053W 1470 nt6.92□□□□□ -1.3
RPN9Q04062 TDP1YBR223C 1635 nt6.92□□□□□ -1.3
RPN9Q04062 BIM1YER016W 1035 nt6.92□□□□□ -1.3
RPN9Q04062 YJL163CYJL163C 1668 nt6.91□□□□□ -1.3
Retrieved 100 of 7,029 protein–RNA pairs in 35.3 ms