Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
GABREP78334 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.93■■□□□ 1.42
GABREP78334 AC026202.3-201ENST00000600805 1127 ntBASIC23.92■■□□□ 1.42
GABREP78334 BHLHE23-202ENST00000612929 1109 ntBASIC23.92■■□□□ 1.42
GABREP78334 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.92■■□□□ 1.42
GABREP78334 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
GABREP78334 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
GABREP78334 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
GABREP78334 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.91■■□□□ 1.42
GABREP78334 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
GABREP78334 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
GABREP78334 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
GABREP78334 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.9■■□□□ 1.42
GABREP78334 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.89■■□□□ 1.42
GABREP78334 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.89■■□□□ 1.42
GABREP78334 DUX4L9-201ENST00000449051 1259 ntBASIC23.89■■□□□ 1.41
GABREP78334 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.89■■□□□ 1.41
GABREP78334 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.89■■□□□ 1.41
GABREP78334 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.88■■□□□ 1.41
GABREP78334 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
GABREP78334 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
GABREP78334 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
GABREP78334 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
GABREP78334 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
GABREP78334 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
GABREP78334 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.87■■□□□ 1.41
GABREP78334 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
GABREP78334 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
GABREP78334 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
GABREP78334 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
GABREP78334 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
GABREP78334 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
GABREP78334 AC010980.1-201ENST00000587192 1142 ntBASIC23.86■■□□□ 1.41
GABREP78334 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
GABREP78334 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
GABREP78334 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.85■■□□□ 1.41
GABREP78334 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
GABREP78334 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.85■■□□□ 1.41
GABREP78334 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
GABREP78334 RP9P-202ENST00000450133 1212 ntBASIC23.85■■□□□ 1.41
GABREP78334 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.85■■□□□ 1.41
GABREP78334 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.85■■□□□ 1.41
GABREP78334 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
GABREP78334 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
GABREP78334 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.85■■□□□ 1.41
GABREP78334 KRT8P33-201ENST00000508125 1423 ntBASIC23.84■■□□□ 1.41
GABREP78334 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
GABREP78334 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
GABREP78334 AC025884.2-201ENST00000553429 711 ntBASIC23.84■■□□□ 1.41
GABREP78334 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
GABREP78334 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
GABREP78334 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
GABREP78334 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.83■■□□□ 1.41
GABREP78334 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.83■■□□□ 1.41
GABREP78334 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
GABREP78334 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
GABREP78334 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
GABREP78334 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
GABREP78334 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.82■■□□□ 1.4
GABREP78334 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.82■■□□□ 1.4
GABREP78334 AC093536.1-201ENST00000569153 554 ntBASIC23.82■■□□□ 1.4
GABREP78334 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
GABREP78334 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
GABREP78334 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.81■■□□□ 1.4
GABREP78334 AP004833.2-201ENST00000532228 1454 ntBASIC23.81■■□□□ 1.4
GABREP78334 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
GABREP78334 AC139795.1-202ENST00000500444 432 ntBASIC23.8■■□□□ 1.4
GABREP78334 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GABREP78334 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GABREP78334 AC074183.2-201ENST00000623112 922 ntBASIC23.8■■□□□ 1.4
GABREP78334 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GABREP78334 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
GABREP78334 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GABREP78334 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
GABREP78334 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.79■■□□□ 1.4
GABREP78334 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GABREP78334 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
GABREP78334 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.78■■□□□ 1.4
GABREP78334 AC100797.4-201ENST00000631653 1827 ntBASIC23.78■■□□□ 1.4
GABREP78334 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GABREP78334 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.78■■□□□ 1.4
GABREP78334 SPCS2P3-201ENST00000500401 656 ntBASIC23.78■■□□□ 1.4
GABREP78334 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.78■■□□□ 1.4
GABREP78334 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
GABREP78334 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GABREP78334 AL592295.1-201ENST00000400984 884 ntBASIC23.77■■□□□ 1.4
GABREP78334 RAP2CP1-202ENST00000605179 643 ntBASIC23.77■■□□□ 1.4
GABREP78334 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GABREP78334 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GABREP78334 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.76■■□□□ 1.39
GABREP78334 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
GABREP78334 YBX1P4-201ENST00000392794 808 ntBASIC23.76■■□□□ 1.39
GABREP78334 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.76■■□□□ 1.39
GABREP78334 AC009299.2-201ENST00000482477 511 ntBASIC23.76■■□□□ 1.39
GABREP78334 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GABREP78334 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
GABREP78334 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GABREP78334 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
GABREP78334 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.75■■□□□ 1.39
GABREP78334 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms