Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 BX255925.1-201ENST00000566954 1854 ntBASIC17.12■□□□□ 0.33
CKS1BP61024 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CKS1BP61024 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKS1BP61024 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CKS1BP61024 RARRES2P7-201ENST00000567349 469 ntBASIC17.11■□□□□ 0.33
CKS1BP61024 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKS1BP61024 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKS1BP61024 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CKS1BP61024 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKS1BP61024 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKS1BP61024 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.1■□□□□ 0.33
CKS1BP61024 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.1■□□□□ 0.33
CKS1BP61024 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKS1BP61024 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.09■□□□□ 0.33
CKS1BP61024 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKS1BP61024 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKS1BP61024 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CKS1BP61024 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.09■□□□□ 0.33
CKS1BP61024 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKS1BP61024 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.09■□□□□ 0.33
CKS1BP61024 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKS1BP61024 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKS1BP61024 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CKS1BP61024 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CKS1BP61024 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CKS1BP61024 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKS1BP61024 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKS1BP61024 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKS1BP61024 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CKS1BP61024 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.08■□□□□ 0.32
CKS1BP61024 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CKS1BP61024 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKS1BP61024 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKS1BP61024 AC133561.1-201ENST00000568600 2415 ntBASIC17.08■□□□□ 0.32
CKS1BP61024 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CKS1BP61024 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKS1BP61024 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKS1BP61024 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKS1BP61024 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CKS1BP61024 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CKS1BP61024 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKS1BP61024 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.07■□□□□ 0.32
CKS1BP61024 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.07■□□□□ 0.32
CKS1BP61024 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.07■□□□□ 0.32
CKS1BP61024 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC17.07■□□□□ 0.32
CKS1BP61024 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CKS1BP61024 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CKS1BP61024 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CKS1BP61024 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKS1BP61024 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CKS1BP61024 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKS1BP61024 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKS1BP61024 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKS1BP61024 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CKS1BP61024 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 SETD8P1-201ENST00000623146 1180 ntBASIC17.05■□□□□ 0.32
CKS1BP61024 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.05■□□□□ 0.32
CKS1BP61024 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
CKS1BP61024 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CKS1BP61024 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS1BP61024 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CKS1BP61024 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CKS1BP61024 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CKS1BP61024 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CKS1BP61024 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CKS1BP61024 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CKS1BP61024 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.04■□□□□ 0.32
CKS1BP61024 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CKS1BP61024 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CKS1BP61024 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CKS1BP61024 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CKS1BP61024 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CKS1BP61024 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CKS1BP61024 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CKS1BP61024 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CKS1BP61024 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CKS1BP61024 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CKS1BP61024 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CKS1BP61024 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CKS1BP61024 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CKS1BP61024 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CKS1BP61024 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC17.02■□□□□ 0.32
CKS1BP61024 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CKS1BP61024 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CKS1BP61024 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CKS1BP61024 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CKS1BP61024 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CKS1BP61024 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CKS1BP61024 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.01■□□□□ 0.31
CKS1BP61024 AC127502.1-201ENST00000399971 1502 ntBASIC17.01■□□□□ 0.31
CKS1BP61024 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKS1BP61024 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms