Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.7■■■□□ 2.67
TM4SF1P30408 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
TM4SF1P30408 SPCS2P3-201ENST00000500401 656 ntBASIC31.7■■■□□ 2.67
TM4SF1P30408 RAP2CP1-202ENST00000605179 643 ntBASIC31.7■■■□□ 2.67
TM4SF1P30408 AP004833.2-201ENST00000532228 1454 ntBASIC31.7■■■□□ 2.66
TM4SF1P30408 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
TM4SF1P30408 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
TM4SF1P30408 RP9P-202ENST00000450133 1212 ntBASIC31.69■■■□□ 2.66
TM4SF1P30408 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.69■■■□□ 2.66
TM4SF1P30408 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.69■■■□□ 2.66
TM4SF1P30408 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.69■■■□□ 2.66
TM4SF1P30408 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TM4SF1P30408 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
TM4SF1P30408 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
TM4SF1P30408 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.68■■■□□ 2.66
TM4SF1P30408 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TM4SF1P30408 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.68■■■□□ 2.66
TM4SF1P30408 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
TM4SF1P30408 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
TM4SF1P30408 AC010980.1-201ENST00000587192 1142 ntBASIC31.67■■■□□ 2.66
TM4SF1P30408 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
TM4SF1P30408 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
TM4SF1P30408 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.66■■■□□ 2.66
TM4SF1P30408 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
TM4SF1P30408 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TM4SF1P30408 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.65■■■□□ 2.66
TM4SF1P30408 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
TM4SF1P30408 AC074183.2-201ENST00000623112 922 ntBASIC31.65■■■□□ 2.66
TM4SF1P30408 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.65■■■□□ 2.66
TM4SF1P30408 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.65■■■□□ 2.66
TM4SF1P30408 AC100797.4-201ENST00000631653 1827 ntBASIC31.64■■■□□ 2.66
TM4SF1P30408 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
TM4SF1P30408 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
TM4SF1P30408 AC093536.1-201ENST00000569153 554 ntBASIC31.64■■■□□ 2.66
TM4SF1P30408 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
TM4SF1P30408 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
TM4SF1P30408 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
TM4SF1P30408 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.63■■■□□ 2.65
TM4SF1P30408 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.63■■■□□ 2.65
TM4SF1P30408 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.63■■■□□ 2.65
TM4SF1P30408 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TM4SF1P30408 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TM4SF1P30408 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TM4SF1P30408 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
TM4SF1P30408 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TM4SF1P30408 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.61■■■□□ 2.65
TM4SF1P30408 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.61■■■□□ 2.65
TM4SF1P30408 AC103834.1-201ENST00000520383 144 ntBASIC31.61■■■□□ 2.65
TM4SF1P30408 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.61■■■□□ 2.65
TM4SF1P30408 BHLHE23-202ENST00000612929 1109 ntBASIC31.61■■■□□ 2.65
TM4SF1P30408 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.61■■■□□ 2.65
TM4SF1P30408 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TM4SF1P30408 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
TM4SF1P30408 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TM4SF1P30408 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TM4SF1P30408 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
TM4SF1P30408 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
TM4SF1P30408 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.59■■■□□ 2.65
TM4SF1P30408 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.58■■■□□ 2.65
TM4SF1P30408 AC009299.2-201ENST00000482477 511 ntBASIC31.58■■■□□ 2.65
TM4SF1P30408 ST7-AS1-201ENST00000456775 1889 ntBASIC31.58■■■□□ 2.65
TM4SF1P30408 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
TM4SF1P30408 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
TM4SF1P30408 KRT8P33-201ENST00000508125 1423 ntBASIC31.58■■■□□ 2.65
TM4SF1P30408 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.57■■■□□ 2.64
TM4SF1P30408 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
TM4SF1P30408 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC31.57■■■□□ 2.64
TM4SF1P30408 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.57■■■□□ 2.64
TM4SF1P30408 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
TM4SF1P30408 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TM4SF1P30408 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.56■■■□□ 2.64
TM4SF1P30408 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
TM4SF1P30408 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
TM4SF1P30408 PVT1_1.1-201ENST00000615125 194 ntBASIC31.56■■■□□ 2.64
TM4SF1P30408 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
TM4SF1P30408 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.55■■■□□ 2.64
TM4SF1P30408 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC31.55■■■□□ 2.64
TM4SF1P30408 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
TM4SF1P30408 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.55■■■□□ 2.64
TM4SF1P30408 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TM4SF1P30408 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC31.54■■■□□ 2.64
TM4SF1P30408 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TM4SF1P30408 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.53■■■□□ 2.64
TM4SF1P30408 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TM4SF1P30408 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.53■■■□□ 2.64
TM4SF1P30408 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.53■■■□□ 2.64
TM4SF1P30408 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TM4SF1P30408 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TM4SF1P30408 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TM4SF1P30408 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.64
TM4SF1P30408 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.51■■■□□ 2.64
TM4SF1P30408 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC31.51■■■□□ 2.63
TM4SF1P30408 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.5■■■□□ 2.63
TM4SF1P30408 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.5■■■□□ 2.63
TM4SF1P30408 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TM4SF1P30408 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
TM4SF1P30408 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
TM4SF1P30408 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TM4SF1P30408 MIR6765-201ENST00000614092 87 ntBASIC31.5■■■□□ 2.63
TM4SF1P30408 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31.49■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms