Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.07■■□□□ 1.12
SPARCP09486 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPARCP09486 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPARCP09486 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPARCP09486 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPARCP09486 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPARCP09486 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
SPARCP09486 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPARCP09486 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.05■■□□□ 1.12
SPARCP09486 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
SPARCP09486 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SPARCP09486 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPARCP09486 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SPARCP09486 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.04■■□□□ 1.12
SPARCP09486 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SPARCP09486 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SPARCP09486 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.04■■□□□ 1.12
SPARCP09486 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.03■■□□□ 1.12
SPARCP09486 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.03■■□□□ 1.12
SPARCP09486 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.03■■□□□ 1.12
SPARCP09486 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPARCP09486 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPARCP09486 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPARCP09486 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SPARCP09486 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
SPARCP09486 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SPARCP09486 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SPARCP09486 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
SPARCP09486 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.01■■□□□ 1.11
SPARCP09486 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
SPARCP09486 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SPARCP09486 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22■■□□□ 1.11
SPARCP09486 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SPARCP09486 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
SPARCP09486 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22■■□□□ 1.11
SPARCP09486 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22■■□□□ 1.11
SPARCP09486 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22■■□□□ 1.11
SPARCP09486 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPARCP09486 AL449106.1-201ENST00000608517 1980 ntBASIC21.99■■□□□ 1.11
SPARCP09486 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SPARCP09486 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SPARCP09486 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPARCP09486 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.98■■□□□ 1.11
SPARCP09486 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
SPARCP09486 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.98■■□□□ 1.11
SPARCP09486 RPS2P35-201ENST00000443417 897 ntBASIC21.98■■□□□ 1.11
SPARCP09486 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.98■■□□□ 1.11
SPARCP09486 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPARCP09486 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPARCP09486 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.97■■□□□ 1.11
SPARCP09486 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPARCP09486 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SPARCP09486 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.97■■□□□ 1.11
SPARCP09486 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.96■■□□□ 1.11
SPARCP09486 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.96■■□□□ 1.11
SPARCP09486 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.96■■□□□ 1.11
SPARCP09486 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
SPARCP09486 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
SPARCP09486 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SPARCP09486 AP004609.3-201ENST00000610705 1884 ntBASIC21.95■■□□□ 1.1
SPARCP09486 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.95■■□□□ 1.1
SPARCP09486 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.95■■□□□ 1.1
SPARCP09486 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.95■■□□□ 1.1
SPARCP09486 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SPARCP09486 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SPARCP09486 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.94■■□□□ 1.1
SPARCP09486 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SPARCP09486 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.94■■□□□ 1.1
SPARCP09486 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPARCP09486 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.93■■□□□ 1.1
SPARCP09486 AC091060.1-201ENST00000623524 1766 ntBASIC21.93■■□□□ 1.1
SPARCP09486 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.93■■□□□ 1.1
SPARCP09486 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPARCP09486 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPARCP09486 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.92■■□□□ 1.1
SPARCP09486 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.92■■□□□ 1.1
SPARCP09486 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SPARCP09486 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPARCP09486 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
SPARCP09486 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SPARCP09486 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SPARCP09486 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SPARCP09486 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SPARCP09486 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.89■■□□□ 1.09
SPARCP09486 WHAMMP3-201ENST00000611636 1609 ntBASIC21.89■■□□□ 1.09
SPARCP09486 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPARCP09486 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SPARCP09486 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SPARCP09486 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.88■■□□□ 1.09
SPARCP09486 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.88■■□□□ 1.09
SPARCP09486 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SPARCP09486 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SPARCP09486 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.87■■□□□ 1.09
SPARCP09486 LINC01971-201ENST00000617888 1048 ntBASIC21.87■■□□□ 1.09
SPARCP09486 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SPARCP09486 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SPARCP09486 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SPARCP09486 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
SPARCP09486 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SPARCP09486 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms