Protein–RNA interactions for Protein: O15165

LDLRAD4, Low-density lipoprotein receptor class A domain-containing protein 4, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4O15165 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LDLRAD4O15165 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
LDLRAD4O15165 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.28■■□□□ 1
LDLRAD4O15165 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LDLRAD4O15165 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LDLRAD4O15165 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.28■■□□□ 1
LDLRAD4O15165 MIR6090-201ENST00000622481 60 ntBASIC21.28■■□□□ 1
LDLRAD4O15165 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LDLRAD4O15165 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.27■■□□□ 1
LDLRAD4O15165 AC005559.1-201ENST00000589661 871 ntBASIC21.27■■□□□ 1
LDLRAD4O15165 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.27■■□□□ 1
LDLRAD4O15165 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
LDLRAD4O15165 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.27■■□□□ 1
LDLRAD4O15165 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.27■□□□□ 0.99
LDLRAD4O15165 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LDLRAD4O15165 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LDLRAD4O15165 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
LDLRAD4O15165 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LDLRAD4O15165 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.26■□□□□ 0.99
LDLRAD4O15165 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LDLRAD4O15165 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.25■□□□□ 0.99
LDLRAD4O15165 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LDLRAD4O15165 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
LDLRAD4O15165 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LDLRAD4O15165 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.24■□□□□ 0.99
LDLRAD4O15165 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LDLRAD4O15165 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LDLRAD4O15165 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LDLRAD4O15165 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
LDLRAD4O15165 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.23■□□□□ 0.99
LDLRAD4O15165 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LDLRAD4O15165 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LDLRAD4O15165 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LDLRAD4O15165 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.22■□□□□ 0.99
LDLRAD4O15165 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LDLRAD4O15165 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LDLRAD4O15165 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LDLRAD4O15165 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LDLRAD4O15165 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LDLRAD4O15165 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.22■□□□□ 0.99
LDLRAD4O15165 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LDLRAD4O15165 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LDLRAD4O15165 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
LDLRAD4O15165 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LDLRAD4O15165 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
LDLRAD4O15165 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LDLRAD4O15165 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.19■□□□□ 0.98
LDLRAD4O15165 AC142472.1-201ENST00000612013 1741 ntBASIC21.19■□□□□ 0.98
LDLRAD4O15165 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.19■□□□□ 0.98
LDLRAD4O15165 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDLRAD4O15165 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LDLRAD4O15165 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.18■□□□□ 0.98
LDLRAD4O15165 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LDLRAD4O15165 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.18■□□□□ 0.98
LDLRAD4O15165 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LDLRAD4O15165 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
LDLRAD4O15165 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.18■□□□□ 0.98
LDLRAD4O15165 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.17■□□□□ 0.98
LDLRAD4O15165 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LDLRAD4O15165 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.17■□□□□ 0.98
LDLRAD4O15165 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LDLRAD4O15165 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
LDLRAD4O15165 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LDLRAD4O15165 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LDLRAD4O15165 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.16■□□□□ 0.98
LDLRAD4O15165 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LDLRAD4O15165 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LDLRAD4O15165 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.15■□□□□ 0.98
LDLRAD4O15165 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.15■□□□□ 0.98
LDLRAD4O15165 SUZ12P1-203ENST00000578195 985 ntBASIC21.15■□□□□ 0.98
LDLRAD4O15165 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.15■□□□□ 0.98
LDLRAD4O15165 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LDLRAD4O15165 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.15■□□□□ 0.98
LDLRAD4O15165 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.14■□□□□ 0.98
LDLRAD4O15165 AC093323.1-202ENST00000635031 2045 ntBASIC21.14■□□□□ 0.98
LDLRAD4O15165 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LDLRAD4O15165 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
LDLRAD4O15165 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LDLRAD4O15165 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.14■□□□□ 0.97
LDLRAD4O15165 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LDLRAD4O15165 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
LDLRAD4O15165 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
LDLRAD4O15165 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LDLRAD4O15165 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LDLRAD4O15165 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LDLRAD4O15165 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LDLRAD4O15165 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LDLRAD4O15165 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.12■□□□□ 0.97
LDLRAD4O15165 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.12■□□□□ 0.97
LDLRAD4O15165 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.12■□□□□ 0.97
LDLRAD4O15165 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LDLRAD4O15165 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LDLRAD4O15165 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.12■□□□□ 0.97
LDLRAD4O15165 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.11■□□□□ 0.97
LDLRAD4O15165 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LDLRAD4O15165 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LDLRAD4O15165 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.11■□□□□ 0.97
LDLRAD4O15165 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.11■□□□□ 0.97
LDLRAD4O15165 DUX4L28-201ENST00000623687 678 ntBASIC21.11■□□□□ 0.97
LDLRAD4O15165 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms