Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC29.99■■■□□ 2.39
TMEM88BA6NKF7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
TMEM88BA6NKF7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
TMEM88BA6NKF7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
TMEM88BA6NKF7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC29.97■■■□□ 2.39
TMEM88BA6NKF7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC29.97■■■□□ 2.39
TMEM88BA6NKF7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
TMEM88BA6NKF7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
TMEM88BA6NKF7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC29.96■■■□□ 2.39
TMEM88BA6NKF7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.95■■■□□ 2.39
TMEM88BA6NKF7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC29.95■■■□□ 2.39
TMEM88BA6NKF7 AL031848.2-201ENST00000607670 837 ntBASIC29.95■■■□□ 2.39
TMEM88BA6NKF7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
TMEM88BA6NKF7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC29.94■■■□□ 2.38
TMEM88BA6NKF7 RAP2CP1-202ENST00000605179 643 ntBASIC29.94■■■□□ 2.38
TMEM88BA6NKF7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
TMEM88BA6NKF7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
TMEM88BA6NKF7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.93■■■□□ 2.38
TMEM88BA6NKF7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
TMEM88BA6NKF7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
TMEM88BA6NKF7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC29.93■■■□□ 2.38
TMEM88BA6NKF7 AC103724.3-201ENST00000564481 992 ntBASIC29.93■■■□□ 2.38
TMEM88BA6NKF7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
TMEM88BA6NKF7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.91■■■□□ 2.38
TMEM88BA6NKF7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC29.91■■■□□ 2.38
TMEM88BA6NKF7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC29.91■■■□□ 2.38
TMEM88BA6NKF7 AC093536.1-201ENST00000569153 554 ntBASIC29.91■■■□□ 2.38
TMEM88BA6NKF7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.91■■■□□ 2.38
TMEM88BA6NKF7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
TMEM88BA6NKF7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
TMEM88BA6NKF7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC29.9■■■□□ 2.38
TMEM88BA6NKF7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
TMEM88BA6NKF7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
TMEM88BA6NKF7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
TMEM88BA6NKF7 MIR638-201ENST00000385237 100 ntBASIC29.88■■■□□ 2.37
TMEM88BA6NKF7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
TMEM88BA6NKF7 AC239859.2-201ENST00000444165 318 ntBASIC29.87■■■□□ 2.37
TMEM88BA6NKF7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC29.87■■■□□ 2.37
TMEM88BA6NKF7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.87■■■□□ 2.37
TMEM88BA6NKF7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC29.86■■■□□ 2.37
TMEM88BA6NKF7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC29.86■■■□□ 2.37
TMEM88BA6NKF7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.86■■■□□ 2.37
TMEM88BA6NKF7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC29.86■■■□□ 2.37
TMEM88BA6NKF7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
TMEM88BA6NKF7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
TMEM88BA6NKF7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC29.85■■■□□ 2.37
TMEM88BA6NKF7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
TMEM88BA6NKF7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.85■■■□□ 2.37
TMEM88BA6NKF7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC29.84■■■□□ 2.37
TMEM88BA6NKF7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TMEM88BA6NKF7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC29.84■■■□□ 2.37
TMEM88BA6NKF7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC29.84■■■□□ 2.37
TMEM88BA6NKF7 AC018755.3-202ENST00000596210 929 ntBASIC29.84■■■□□ 2.37
TMEM88BA6NKF7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.83■■■□□ 2.37
TMEM88BA6NKF7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC29.83■■■□□ 2.37
TMEM88BA6NKF7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC29.83■■■□□ 2.37
TMEM88BA6NKF7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
TMEM88BA6NKF7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
TMEM88BA6NKF7 GRAMD4P7-201ENST00000578182 1232 ntBASIC29.81■■■□□ 2.36
TMEM88BA6NKF7 AL359258.2-201ENST00000564063 1566 ntBASIC29.81■■■□□ 2.36
TMEM88BA6NKF7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TMEM88BA6NKF7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
TMEM88BA6NKF7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
TMEM88BA6NKF7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
TMEM88BA6NKF7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
TMEM88BA6NKF7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
TMEM88BA6NKF7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.79■■■□□ 2.36
TMEM88BA6NKF7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TMEM88BA6NKF7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC29.78■■■□□ 2.36
TMEM88BA6NKF7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC29.78■■■□□ 2.36
TMEM88BA6NKF7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
TMEM88BA6NKF7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TMEM88BA6NKF7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC29.77■■■□□ 2.36
TMEM88BA6NKF7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TMEM88BA6NKF7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
TMEM88BA6NKF7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
TMEM88BA6NKF7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TMEM88BA6NKF7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
TMEM88BA6NKF7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
TMEM88BA6NKF7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC29.76■■■□□ 2.35
TMEM88BA6NKF7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC29.76■■■□□ 2.35
TMEM88BA6NKF7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC29.75■■■□□ 2.35
TMEM88BA6NKF7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC29.74■■■□□ 2.35
TMEM88BA6NKF7 Z92544.1-202ENST00000571933 1220 ntBASIC29.74■■■□□ 2.35
TMEM88BA6NKF7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC29.74■■■□□ 2.35
TMEM88BA6NKF7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
TMEM88BA6NKF7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.74■■■□□ 2.35
TMEM88BA6NKF7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
TMEM88BA6NKF7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
TMEM88BA6NKF7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC29.73■■■□□ 2.35
TMEM88BA6NKF7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.72■■■□□ 2.35
TMEM88BA6NKF7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
TMEM88BA6NKF7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
TMEM88BA6NKF7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC29.71■■■□□ 2.35
TMEM88BA6NKF7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC29.71■■■□□ 2.35
TMEM88BA6NKF7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.71■■■□□ 2.35
TMEM88BA6NKF7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.71■■■□□ 2.35
TMEM88BA6NKF7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
TMEM88BA6NKF7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
TMEM88BA6NKF7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.7■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms