Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-6A0A0B4J262 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-6A0A0B4J262 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-6A0A0B4J262 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-6A0A0B4J262 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-6A0A0B4J262 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-6A0A0B4J262 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-6A0A0B4J262 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRAV8-6A0A0B4J262 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-6A0A0B4J262 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV8-6A0A0B4J262 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV8-6A0A0B4J262 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.03■□□□□ 0.48
TRAV8-6A0A0B4J262 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV8-6A0A0B4J262 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV8-6A0A0B4J262 DUX4L28-201ENST00000623687 678 ntBASIC18.03■□□□□ 0.48
TRAV8-6A0A0B4J262 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV8-6A0A0B4J262 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV8-6A0A0B4J262 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TRAV8-6A0A0B4J262 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV8-6A0A0B4J262 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV8-6A0A0B4J262 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-6A0A0B4J262 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-6A0A0B4J262 AC108673.1-201ENST00000510422 1159 ntBASIC18.02■□□□□ 0.48
TRAV8-6A0A0B4J262 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV8-6A0A0B4J262 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-6A0A0B4J262 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAV8-6A0A0B4J262 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-6A0A0B4J262 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-6A0A0B4J262 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAV8-6A0A0B4J262 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-6A0A0B4J262 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TRAV8-6A0A0B4J262 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-6A0A0B4J262 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-6A0A0B4J262 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-6A0A0B4J262 AC133561.1-201ENST00000568600 2415 ntBASIC18■□□□□ 0.47
TRAV8-6A0A0B4J262 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18■□□□□ 0.47
TRAV8-6A0A0B4J262 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-6A0A0B4J262 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-6A0A0B4J262 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-6A0A0B4J262 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-6A0A0B4J262 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18■□□□□ 0.47
TRAV8-6A0A0B4J262 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-6A0A0B4J262 AC020928.2-201ENST00000588717 2197 ntBASIC18■□□□□ 0.47
TRAV8-6A0A0B4J262 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-6A0A0B4J262 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-6A0A0B4J262 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.99■□□□□ 0.47
TRAV8-6A0A0B4J262 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAV8-6A0A0B4J262 AL162393.1-201ENST00000437852 946 ntBASIC17.99■□□□□ 0.47
TRAV8-6A0A0B4J262 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.99■□□□□ 0.47
TRAV8-6A0A0B4J262 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-6A0A0B4J262 BX255925.1-201ENST00000566954 1854 ntBASIC17.99■□□□□ 0.47
TRAV8-6A0A0B4J262 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-6A0A0B4J262 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-6A0A0B4J262 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-6A0A0B4J262 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.98■□□□□ 0.47
TRAV8-6A0A0B4J262 AC044849.2-201ENST00000606596 710 ntBASIC17.98■□□□□ 0.47
TRAV8-6A0A0B4J262 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-6A0A0B4J262 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRAV8-6A0A0B4J262 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRAV8-6A0A0B4J262 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-6A0A0B4J262 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
TRAV8-6A0A0B4J262 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC17.98■□□□□ 0.47
TRAV8-6A0A0B4J262 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-6A0A0B4J262 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-6A0A0B4J262 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV8-6A0A0B4J262 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-6A0A0B4J262 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-6A0A0B4J262 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRAV8-6A0A0B4J262 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV8-6A0A0B4J262 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV8-6A0A0B4J262 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
TRAV8-6A0A0B4J262 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV8-6A0A0B4J262 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV8-6A0A0B4J262 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV8-6A0A0B4J262 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRAV8-6A0A0B4J262 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-6A0A0B4J262 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.95■□□□□ 0.46
TRAV8-6A0A0B4J262 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRAV8-6A0A0B4J262 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-6A0A0B4J262 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-6A0A0B4J262 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-6A0A0B4J262 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-6A0A0B4J262 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-6A0A0B4J262 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-6A0A0B4J262 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV8-6A0A0B4J262 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRAV8-6A0A0B4J262 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV8-6A0A0B4J262 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV8-6A0A0B4J262 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV8-6A0A0B4J262 AC087741.3-201ENST00000624270 1347 ntBASIC17.94■□□□□ 0.46
TRAV8-6A0A0B4J262 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV8-6A0A0B4J262 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV8-6A0A0B4J262 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV8-6A0A0B4J262 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV8-6A0A0B4J262 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV8-6A0A0B4J262 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRAV8-6A0A0B4J262 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-6A0A0B4J262 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAV8-6A0A0B4J262 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-6A0A0B4J262 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms