Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV12-1A0A0B4J245 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV12-1A0A0B4J245 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV12-1A0A0B4J245 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV12-1A0A0B4J245 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV12-1A0A0B4J245 DYNLL1-208ENST00000550178 581 ntBASIC17.48■□□□□ 0.39
TRAV12-1A0A0B4J245 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV12-1A0A0B4J245 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV12-1A0A0B4J245 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV12-1A0A0B4J245 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV12-1A0A0B4J245 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV12-1A0A0B4J245 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV12-1A0A0B4J245 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV12-1A0A0B4J245 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV12-1A0A0B4J245 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV12-1A0A0B4J245 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV12-1A0A0B4J245 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV12-1A0A0B4J245 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRAV12-1A0A0B4J245 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV12-1A0A0B4J245 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV12-1A0A0B4J245 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV12-1A0A0B4J245 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV12-1A0A0B4J245 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV12-1A0A0B4J245 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV12-1A0A0B4J245 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV12-1A0A0B4J245 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV12-1A0A0B4J245 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV12-1A0A0B4J245 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TRAV12-1A0A0B4J245 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRAV12-1A0A0B4J245 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV12-1A0A0B4J245 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV12-1A0A0B4J245 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV12-1A0A0B4J245 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV12-1A0A0B4J245 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV12-1A0A0B4J245 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV12-1A0A0B4J245 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV12-1A0A0B4J245 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV12-1A0A0B4J245 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV12-1A0A0B4J245 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV12-1A0A0B4J245 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV12-1A0A0B4J245 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV12-1A0A0B4J245 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV12-1A0A0B4J245 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV12-1A0A0B4J245 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV12-1A0A0B4J245 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV12-1A0A0B4J245 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV12-1A0A0B4J245 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV12-1A0A0B4J245 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRAV12-1A0A0B4J245 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV12-1A0A0B4J245 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRAV12-1A0A0B4J245 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRAV12-1A0A0B4J245 AC012676.1-201ENST00000574705 1949 ntBASIC17.41■□□□□ 0.38
TRAV12-1A0A0B4J245 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV12-1A0A0B4J245 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV12-1A0A0B4J245 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV12-1A0A0B4J245 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV12-1A0A0B4J245 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV12-1A0A0B4J245 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV12-1A0A0B4J245 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TRAV12-1A0A0B4J245 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV12-1A0A0B4J245 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV12-1A0A0B4J245 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV12-1A0A0B4J245 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAV12-1A0A0B4J245 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV12-1A0A0B4J245 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV12-1A0A0B4J245 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.39■□□□□ 0.38
TRAV12-1A0A0B4J245 AC142381.3-201ENST00000568208 1670 ntBASIC17.39■□□□□ 0.37
TRAV12-1A0A0B4J245 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV12-1A0A0B4J245 AL031258.1-201ENST00000623562 325 ntBASIC17.39■□□□□ 0.37
TRAV12-1A0A0B4J245 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV12-1A0A0B4J245 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV12-1A0A0B4J245 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV12-1A0A0B4J245 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV12-1A0A0B4J245 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV12-1A0A0B4J245 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV12-1A0A0B4J245 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRAV12-1A0A0B4J245 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV12-1A0A0B4J245 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV12-1A0A0B4J245 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV12-1A0A0B4J245 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV12-1A0A0B4J245 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV12-1A0A0B4J245 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRAV12-1A0A0B4J245 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV12-1A0A0B4J245 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV12-1A0A0B4J245 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV12-1A0A0B4J245 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRAV12-1A0A0B4J245 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
TRAV12-1A0A0B4J245 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV12-1A0A0B4J245 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV12-1A0A0B4J245 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRAV12-1A0A0B4J245 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV12-1A0A0B4J245 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRAV12-1A0A0B4J245 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRAV12-1A0A0B4J245 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRAV12-1A0A0B4J245 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV12-1A0A0B4J245 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV12-1A0A0B4J245 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
TRAV12-1A0A0B4J245 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV12-1A0A0B4J245 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.34■□□□□ 0.37
TRAV12-1A0A0B4J245 AP004609.3-201ENST00000610705 1884 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms