Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRAV13-2A0A0B4J235 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV13-2A0A0B4J235 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV13-2A0A0B4J235 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV13-2A0A0B4J235 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV13-2A0A0B4J235 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV13-2A0A0B4J235 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV13-2A0A0B4J235 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV13-2A0A0B4J235 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV13-2A0A0B4J235 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV13-2A0A0B4J235 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV13-2A0A0B4J235 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
TRAV13-2A0A0B4J235 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV13-2A0A0B4J235 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV13-2A0A0B4J235 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TRAV13-2A0A0B4J235 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV13-2A0A0B4J235 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRAV13-2A0A0B4J235 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV13-2A0A0B4J235 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV13-2A0A0B4J235 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV13-2A0A0B4J235 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV13-2A0A0B4J235 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV13-2A0A0B4J235 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV13-2A0A0B4J235 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV13-2A0A0B4J235 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV13-2A0A0B4J235 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAV13-2A0A0B4J235 AP002414.2-202ENST00000590929 1450 ntBASIC16.38■□□□□ 0.21
TRAV13-2A0A0B4J235 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV13-2A0A0B4J235 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV13-2A0A0B4J235 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV13-2A0A0B4J235 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAV13-2A0A0B4J235 AC092803.2-201ENST00000564287 1899 ntBASIC16.37■□□□□ 0.21
TRAV13-2A0A0B4J235 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV13-2A0A0B4J235 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
TRAV13-2A0A0B4J235 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV13-2A0A0B4J235 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV13-2A0A0B4J235 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV13-2A0A0B4J235 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV13-2A0A0B4J235 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV13-2A0A0B4J235 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV13-2A0A0B4J235 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV13-2A0A0B4J235 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRAV13-2A0A0B4J235 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRAV13-2A0A0B4J235 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV13-2A0A0B4J235 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRAV13-2A0A0B4J235 AC006077.2-201ENST00000623591 457 ntBASIC16.35■□□□□ 0.21
TRAV13-2A0A0B4J235 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV13-2A0A0B4J235 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV13-2A0A0B4J235 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV13-2A0A0B4J235 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV13-2A0A0B4J235 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV13-2A0A0B4J235 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV13-2A0A0B4J235 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC16.34■□□□□ 0.21
TRAV13-2A0A0B4J235 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV13-2A0A0B4J235 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV13-2A0A0B4J235 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRAV13-2A0A0B4J235 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
TRAV13-2A0A0B4J235 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV13-2A0A0B4J235 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.33■□□□□ 0.21
TRAV13-2A0A0B4J235 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV13-2A0A0B4J235 AC100797.4-201ENST00000631653 1827 ntBASIC16.33■□□□□ 0.2
TRAV13-2A0A0B4J235 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV13-2A0A0B4J235 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV13-2A0A0B4J235 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV13-2A0A0B4J235 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV13-2A0A0B4J235 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV13-2A0A0B4J235 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV13-2A0A0B4J235 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TRAV13-2A0A0B4J235 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRAV13-2A0A0B4J235 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV13-2A0A0B4J235 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV13-2A0A0B4J235 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV13-2A0A0B4J235 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRAV13-2A0A0B4J235 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRAV13-2A0A0B4J235 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV13-2A0A0B4J235 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV13-2A0A0B4J235 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRAV13-2A0A0B4J235 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV13-2A0A0B4J235 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV13-2A0A0B4J235 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC16.3■□□□□ 0.2
TRAV13-2A0A0B4J235 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV13-2A0A0B4J235 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV13-2A0A0B4J235 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAV13-2A0A0B4J235 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV13-2A0A0B4J235 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV13-2A0A0B4J235 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV13-2A0A0B4J235 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV13-2A0A0B4J235 AC127502.1-201ENST00000399971 1502 ntBASIC16.29■□□□□ 0.2
TRAV13-2A0A0B4J235 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRAV13-2A0A0B4J235 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV13-2A0A0B4J235 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRAV13-2A0A0B4J235 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV13-2A0A0B4J235 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV13-2A0A0B4J235 DYNLL1-208ENST00000550178 581 ntBASIC16.28■□□□□ 0.2
TRAV13-2A0A0B4J235 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV13-2A0A0B4J235 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV13-2A0A0B4J235 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV13-2A0A0B4J235 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV13-2A0A0B4J235 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV13-2A0A0B4J235 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms