Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV23-1A0A0A0MS06 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV23-1A0A0A0MS06 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TRBV23-1A0A0A0MS06 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV23-1A0A0A0MS06 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV23-1A0A0A0MS06 AC018358.1-201ENST00000631079 1402 ntBASIC20.85■□□□□ 0.93
TRBV23-1A0A0A0MS06 AC142086.6-201ENST00000621154 1765 ntBASIC20.85■□□□□ 0.93
TRBV23-1A0A0A0MS06 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
TRBV23-1A0A0A0MS06 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV23-1A0A0A0MS06 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.83■□□□□ 0.93
TRBV23-1A0A0A0MS06 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TRBV23-1A0A0A0MS06 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TRBV23-1A0A0A0MS06 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.83■□□□□ 0.93
TRBV23-1A0A0A0MS06 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.83■□□□□ 0.93
TRBV23-1A0A0A0MS06 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRBV23-1A0A0A0MS06 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TRBV23-1A0A0A0MS06 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRBV23-1A0A0A0MS06 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV23-1A0A0A0MS06 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV23-1A0A0A0MS06 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.82■□□□□ 0.92
TRBV23-1A0A0A0MS06 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.82■□□□□ 0.92
TRBV23-1A0A0A0MS06 AC148477.6-201ENST00000623746 465 ntBASIC20.82■□□□□ 0.92
TRBV23-1A0A0A0MS06 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.82■□□□□ 0.92
TRBV23-1A0A0A0MS06 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV23-1A0A0A0MS06 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV23-1A0A0A0MS06 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TRBV23-1A0A0A0MS06 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.81■□□□□ 0.92
TRBV23-1A0A0A0MS06 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TRBV23-1A0A0A0MS06 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.8■□□□□ 0.92
TRBV23-1A0A0A0MS06 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.8■□□□□ 0.92
TRBV23-1A0A0A0MS06 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.8■□□□□ 0.92
TRBV23-1A0A0A0MS06 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV23-1A0A0A0MS06 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
TRBV23-1A0A0A0MS06 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.8■□□□□ 0.92
TRBV23-1A0A0A0MS06 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRBV23-1A0A0A0MS06 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TRBV23-1A0A0A0MS06 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBV23-1A0A0A0MS06 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBV23-1A0A0A0MS06 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
TRBV23-1A0A0A0MS06 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.79■□□□□ 0.92
TRBV23-1A0A0A0MS06 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV23-1A0A0A0MS06 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV23-1A0A0A0MS06 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRBV23-1A0A0A0MS06 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV23-1A0A0A0MS06 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV23-1A0A0A0MS06 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV23-1A0A0A0MS06 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV23-1A0A0A0MS06 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV23-1A0A0A0MS06 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV23-1A0A0A0MS06 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.77■□□□□ 0.92
TRBV23-1A0A0A0MS06 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV23-1A0A0A0MS06 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TRBV23-1A0A0A0MS06 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV23-1A0A0A0MS06 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
TRBV23-1A0A0A0MS06 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV23-1A0A0A0MS06 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TRBV23-1A0A0A0MS06 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV23-1A0A0A0MS06 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.77■□□□□ 0.91
TRBV23-1A0A0A0MS06 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.76■□□□□ 0.91
TRBV23-1A0A0A0MS06 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.76■□□□□ 0.91
TRBV23-1A0A0A0MS06 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV23-1A0A0A0MS06 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.75■□□□□ 0.91
TRBV23-1A0A0A0MS06 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV23-1A0A0A0MS06 MIR4449-201ENST00000578365 66 ntBASIC20.75■□□□□ 0.91
TRBV23-1A0A0A0MS06 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.75■□□□□ 0.91
TRBV23-1A0A0A0MS06 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TRBV23-1A0A0A0MS06 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV23-1A0A0A0MS06 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TRBV23-1A0A0A0MS06 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV23-1A0A0A0MS06 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV23-1A0A0A0MS06 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.74■□□□□ 0.91
TRBV23-1A0A0A0MS06 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV23-1A0A0A0MS06 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV23-1A0A0A0MS06 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV23-1A0A0A0MS06 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV23-1A0A0A0MS06 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
TRBV23-1A0A0A0MS06 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TRBV23-1A0A0A0MS06 MIR219A2-201ENST00000608502 1504 ntBASIC20.73■□□□□ 0.91
TRBV23-1A0A0A0MS06 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV23-1A0A0A0MS06 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV23-1A0A0A0MS06 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.72■□□□□ 0.91
TRBV23-1A0A0A0MS06 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.72■□□□□ 0.91
TRBV23-1A0A0A0MS06 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV23-1A0A0A0MS06 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TRBV23-1A0A0A0MS06 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
TRBV23-1A0A0A0MS06 LINC01003-201ENST00000564834 1764 ntBASIC20.72■□□□□ 0.91
TRBV23-1A0A0A0MS06 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.72■□□□□ 0.91
TRBV23-1A0A0A0MS06 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV23-1A0A0A0MS06 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV23-1A0A0A0MS06 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV23-1A0A0A0MS06 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV23-1A0A0A0MS06 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
TRBV23-1A0A0A0MS06 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.71■□□□□ 0.91
TRBV23-1A0A0A0MS06 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV23-1A0A0A0MS06 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV23-1A0A0A0MS06 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV23-1A0A0A0MS06 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV23-1A0A0A0MS06 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV23-1A0A0A0MS06 BX255925.1-201ENST00000566954 1854 ntBASIC20.71■□□□□ 0.91
TRBV23-1A0A0A0MS06 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms