Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.56■■□□□ 1.2
TRAV27A0A087WT01 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
TRAV27A0A087WT01 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRAV27A0A087WT01 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRAV27A0A087WT01 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRAV27A0A087WT01 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV27A0A087WT01 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV27A0A087WT01 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV27A0A087WT01 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.55■■□□□ 1.2
TRAV27A0A087WT01 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.55■■□□□ 1.2
TRAV27A0A087WT01 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
TRAV27A0A087WT01 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV27A0A087WT01 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV27A0A087WT01 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV27A0A087WT01 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV27A0A087WT01 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAV27A0A087WT01 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAV27A0A087WT01 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
TRAV27A0A087WT01 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.53■■□□□ 1.2
TRAV27A0A087WT01 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.52■■□□□ 1.2
TRAV27A0A087WT01 AL449106.1-201ENST00000608517 1980 ntBASIC22.52■■□□□ 1.2
TRAV27A0A087WT01 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.52■■□□□ 1.2
TRAV27A0A087WT01 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRAV27A0A087WT01 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.52■■□□□ 1.2
TRAV27A0A087WT01 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.52■■□□□ 1.2
TRAV27A0A087WT01 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRAV27A0A087WT01 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.5■■□□□ 1.19
TRAV27A0A087WT01 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRAV27A0A087WT01 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.5■■□□□ 1.19
TRAV27A0A087WT01 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.5■■□□□ 1.19
TRAV27A0A087WT01 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.49■■□□□ 1.19
TRAV27A0A087WT01 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAV27A0A087WT01 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRAV27A0A087WT01 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.48■■□□□ 1.19
TRAV27A0A087WT01 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.48■■□□□ 1.19
TRAV27A0A087WT01 RPS2P35-201ENST00000443417 897 ntBASIC22.48■■□□□ 1.19
TRAV27A0A087WT01 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.48■■□□□ 1.19
TRAV27A0A087WT01 AC091060.1-201ENST00000623524 1766 ntBASIC22.48■■□□□ 1.19
TRAV27A0A087WT01 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.47■■□□□ 1.19
TRAV27A0A087WT01 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.47■■□□□ 1.19
TRAV27A0A087WT01 AP004609.3-201ENST00000610705 1884 ntBASIC22.47■■□□□ 1.19
TRAV27A0A087WT01 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRAV27A0A087WT01 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRAV27A0A087WT01 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
TRAV27A0A087WT01 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRAV27A0A087WT01 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.45■■□□□ 1.18
TRAV27A0A087WT01 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
TRAV27A0A087WT01 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.45■■□□□ 1.18
TRAV27A0A087WT01 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRAV27A0A087WT01 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.43■■□□□ 1.18
TRAV27A0A087WT01 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRAV27A0A087WT01 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.43■■□□□ 1.18
TRAV27A0A087WT01 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRAV27A0A087WT01 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
TRAV27A0A087WT01 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
TRAV27A0A087WT01 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.41■■□□□ 1.18
TRAV27A0A087WT01 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.41■■□□□ 1.18
TRAV27A0A087WT01 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
TRAV27A0A087WT01 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.41■■□□□ 1.18
TRAV27A0A087WT01 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRAV27A0A087WT01 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRAV27A0A087WT01 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
TRAV27A0A087WT01 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.39■■□□□ 1.18
TRAV27A0A087WT01 WHAMMP3-201ENST00000611636 1609 ntBASIC22.39■■□□□ 1.18
TRAV27A0A087WT01 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TRAV27A0A087WT01 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.39■■□□□ 1.17
TRAV27A0A087WT01 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TRAV27A0A087WT01 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TRAV27A0A087WT01 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.38■■□□□ 1.17
TRAV27A0A087WT01 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRAV27A0A087WT01 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.38■■□□□ 1.17
TRAV27A0A087WT01 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.38■■□□□ 1.17
TRAV27A0A087WT01 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRAV27A0A087WT01 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRAV27A0A087WT01 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRAV27A0A087WT01 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.37■■□□□ 1.17
TRAV27A0A087WT01 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRAV27A0A087WT01 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TRAV27A0A087WT01 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.37■■□□□ 1.17
TRAV27A0A087WT01 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRAV27A0A087WT01 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRAV27A0A087WT01 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRAV27A0A087WT01 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRAV27A0A087WT01 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRAV27A0A087WT01 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.36■■□□□ 1.17
TRAV27A0A087WT01 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRAV27A0A087WT01 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.36■■□□□ 1.17
TRAV27A0A087WT01 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRAV27A0A087WT01 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRAV27A0A087WT01 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAV27A0A087WT01 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAV27A0A087WT01 LINC01971-201ENST00000617888 1048 ntBASIC22.35■■□□□ 1.17
TRAV27A0A087WT01 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRAV27A0A087WT01 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRAV27A0A087WT01 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRAV27A0A087WT01 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
TRAV27A0A087WT01 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
TRAV27A0A087WT01 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.34■■□□□ 1.17
TRAV27A0A087WT01 AC145676.1-201ENST00000514988 2004 ntBASIC22.34■■□□□ 1.17
TRAV27A0A087WT01 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms