Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 AC079602.3-201ENST00000623931 403 ntBASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PCDHGC4Q9Y5F7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 SDHAP2-201ENST00000455183 2001 ntBASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGC4Q9Y5F7 AC009102.3-201ENST00000623118 1491 ntBASIC18.58■□□□□ 0.57
PCDHGC4Q9Y5F7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGC4Q9Y5F7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
PCDHGC4Q9Y5F7 AC073592.3-201ENST00000625118 1834 ntBASIC18.58■□□□□ 0.57
PCDHGC4Q9Y5F7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGC4Q9Y5F7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGC4Q9Y5F7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PCDHGC4Q9Y5F7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 MIR149-201ENST00000384879 89 ntBASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 KRT18P35-201ENST00000510488 1269 ntBASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 HYMAI.1-201ENST00000620949 238 ntBASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGC4Q9Y5F7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC4Q9Y5F7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms