Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX18Q96RF0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX18Q96RF0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX18Q96RF0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.81■□□□□ 0.28
SNX18Q96RF0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SNX18Q96RF0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
SNX18Q96RF0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.81■□□□□ 0.28
SNX18Q96RF0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.81■□□□□ 0.28
SNX18Q96RF0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.81■□□□□ 0.28
SNX18Q96RF0 HTR7P1-201ENST00000538670 1336 ntBASIC16.81■□□□□ 0.28
SNX18Q96RF0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 PCDHA12-202ENST00000613593 2588 ntBASIC16.81■□□□□ 0.28
SNX18Q96RF0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
SNX18Q96RF0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.81■□□□□ 0.28
SNX18Q96RF0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SNX18Q96RF0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.81■□□□□ 0.28
SNX18Q96RF0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.81■□□□□ 0.28
SNX18Q96RF0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SNX18Q96RF0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SNX18Q96RF0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.81■□□□□ 0.28
SNX18Q96RF0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SNX18Q96RF0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.81■□□□□ 0.28
SNX18Q96RF0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX18Q96RF0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX18Q96RF0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX18Q96RF0 AL391005.1-201ENST00000623953 2435 ntBASIC16.8■□□□□ 0.28
SNX18Q96RF0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SNX18Q96RF0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.8■□□□□ 0.28
SNX18Q96RF0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX18Q96RF0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX18Q96RF0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX18Q96RF0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX18Q96RF0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX18Q96RF0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SNX18Q96RF0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SNX18Q96RF0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.8■□□□□ 0.28
SNX18Q96RF0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.8■□□□□ 0.28
SNX18Q96RF0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX18Q96RF0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.8■□□□□ 0.28
SNX18Q96RF0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
SNX18Q96RF0 AC004951.3-201ENST00000418645 1148 ntBASIC16.8■□□□□ 0.28
SNX18Q96RF0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX18Q96RF0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.8■□□□□ 0.28
SNX18Q96RF0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SNX18Q96RF0 RARRES2P10-201ENST00000564312 460 ntBASIC16.8■□□□□ 0.28
SNX18Q96RF0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.8■□□□□ 0.28
SNX18Q96RF0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SNX18Q96RF0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.8■□□□□ 0.28
SNX18Q96RF0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX18Q96RF0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.8■□□□□ 0.28
SNX18Q96RF0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX18Q96RF0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX18Q96RF0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.8■□□□□ 0.28
SNX18Q96RF0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.8■□□□□ 0.28
SNX18Q96RF0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 KRT16P1-201ENST00000399124 1418 ntBASIC16.79■□□□□ 0.28
SNX18Q96RF0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.79■□□□□ 0.28
SNX18Q96RF0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.79■□□□□ 0.28
SNX18Q96RF0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.79■□□□□ 0.28
SNX18Q96RF0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SNX18Q96RF0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 BCL2-203ENST00000589955 5011 ntBASIC16.79■□□□□ 0.28
SNX18Q96RF0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.79■□□□□ 0.28
SNX18Q96RF0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SNX18Q96RF0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.79■□□□□ 0.28
SNX18Q96RF0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.79■□□□□ 0.28
SNX18Q96RF0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 RPS2P55-201ENST00000397318 883 ntBASIC16.79■□□□□ 0.28
SNX18Q96RF0 AC012618.2-201ENST00000428058 849 ntBASIC16.79■□□□□ 0.28
SNX18Q96RF0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms