Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 LINC00265-3P-201ENST00000447588 903 ntBASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 TPSP2-201ENST00000561760 610 ntBASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 AC024563.2-201ENST00000603282 481 ntBASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 AC093503.3-201ENST00000624917 2352 ntBASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH3RF2Q8TEC5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 DRAXINP1-201ENST00000437611 948 ntBASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 GPR32P1-201ENST00000601788 811 ntBASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 AC083906.6-201ENST00000641366 219 ntBASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SH3RF2Q8TEC5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 IGHGP-201ENST00000390555 1178 ntBASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 AC026396.1-201ENST00000419388 421 ntBASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 KRT18P41-201ENST00000518924 1277 ntBASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 AP000867.3-201ENST00000524675 377 ntBASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 AC090616.6-201ENST00000582640 721 ntBASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SH3RF2Q8TEC5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.08■□□□□ 0.65
SH3RF2Q8TEC5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.08■□□□□ 0.65
SH3RF2Q8TEC5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SH3RF2Q8TEC5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SH3RF2Q8TEC5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.08■□□□□ 0.65
SH3RF2Q8TEC5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SH3RF2Q8TEC5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SH3RF2Q8TEC5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SH3RF2Q8TEC5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms