Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 NCF1B-203ENST00000435988 1254 ntBASIC17.93■□□□□ 0.46
HIPK4Q8NE63 TUBB8P6-201ENST00000436895 1288 ntBASIC17.93■□□□□ 0.46
HIPK4Q8NE63 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.93■□□□□ 0.46
HIPK4Q8NE63 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 AL121829.2-201ENST00000620908 328 ntBASIC17.93■□□□□ 0.46
HIPK4Q8NE63 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 AC012317.2-201ENST00000623305 2251 ntBASIC17.93■□□□□ 0.46
HIPK4Q8NE63 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HIPK4Q8NE63 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HIPK4Q8NE63 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
HIPK4Q8NE63 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms