Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 MIR3180-4-201ENST00000582223 153 ntBASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 SDHAP2-201ENST00000455183 2001 ntBASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 AC090164.3-201ENST00000610780 2143 ntBASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SCUBE3Q8IX30 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 AC063952.2-201ENST00000498792 1227 ntBASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCUBE3Q8IX30 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 RASA4DP-201ENST00000460726 1199 ntBASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SCUBE3Q8IX30 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 STARP1-201ENST00000397973 869 ntBASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.36■□□□□ 0.69
SCUBE3Q8IX30 KRT18P38-201ENST00000449496 1282 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms