Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.29■□□□□ 0.52
APLFQ8IW19 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APLFQ8IW19 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.29■□□□□ 0.52
APLFQ8IW19 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APLFQ8IW19 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
APLFQ8IW19 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
APLFQ8IW19 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
APLFQ8IW19 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APLFQ8IW19 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
APLFQ8IW19 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
APLFQ8IW19 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
APLFQ8IW19 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.28■□□□□ 0.52
APLFQ8IW19 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APLFQ8IW19 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APLFQ8IW19 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APLFQ8IW19 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.28■□□□□ 0.52
APLFQ8IW19 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APLFQ8IW19 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.28■□□□□ 0.52
APLFQ8IW19 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APLFQ8IW19 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APLFQ8IW19 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.28■□□□□ 0.52
APLFQ8IW19 DUX4L26-201ENST00000489078 1255 ntBASIC18.28■□□□□ 0.52
APLFQ8IW19 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.28■□□□□ 0.52
APLFQ8IW19 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.28■□□□□ 0.52
APLFQ8IW19 EGLN1P1-201ENST00000531623 762 ntBASIC18.28■□□□□ 0.52
APLFQ8IW19 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.28■□□□□ 0.52
APLFQ8IW19 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
APLFQ8IW19 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.28■□□□□ 0.52
APLFQ8IW19 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.28■□□□□ 0.52
APLFQ8IW19 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
APLFQ8IW19 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
APLFQ8IW19 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APLFQ8IW19 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.28■□□□□ 0.52
APLFQ8IW19 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
APLFQ8IW19 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
APLFQ8IW19 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
APLFQ8IW19 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APLFQ8IW19 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.28■□□□□ 0.52
APLFQ8IW19 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.28■□□□□ 0.52
APLFQ8IW19 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APLFQ8IW19 PCDHA12-202ENST00000613593 2588 ntBASIC18.28■□□□□ 0.52
APLFQ8IW19 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
APLFQ8IW19 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.27■□□□□ 0.52
APLFQ8IW19 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.27■□□□□ 0.52
APLFQ8IW19 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
APLFQ8IW19 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.27■□□□□ 0.52
APLFQ8IW19 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
APLFQ8IW19 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.27■□□□□ 0.52
APLFQ8IW19 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
APLFQ8IW19 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
APLFQ8IW19 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
APLFQ8IW19 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
APLFQ8IW19 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
APLFQ8IW19 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.27■□□□□ 0.52
APLFQ8IW19 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
APLFQ8IW19 LINC00896-202ENST00000609602 2128 ntBASIC18.27■□□□□ 0.52
APLFQ8IW19 AC073592.3-201ENST00000625118 1834 ntBASIC18.27■□□□□ 0.52
APLFQ8IW19 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
APLFQ8IW19 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
APLFQ8IW19 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
APLFQ8IW19 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
APLFQ8IW19 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
APLFQ8IW19 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
APLFQ8IW19 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.27■□□□□ 0.51
APLFQ8IW19 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
APLFQ8IW19 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.26■□□□□ 0.51
APLFQ8IW19 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
APLFQ8IW19 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
APLFQ8IW19 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
APLFQ8IW19 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
APLFQ8IW19 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
APLFQ8IW19 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.26■□□□□ 0.51
APLFQ8IW19 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
APLFQ8IW19 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APLFQ8IW19 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
APLFQ8IW19 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APLFQ8IW19 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
APLFQ8IW19 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APLFQ8IW19 TSPY14P-201ENST00000303979 915 ntBASIC18.26■□□□□ 0.51
APLFQ8IW19 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
APLFQ8IW19 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
APLFQ8IW19 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.26■□□□□ 0.51
APLFQ8IW19 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.26■□□□□ 0.51
APLFQ8IW19 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.26■□□□□ 0.51
APLFQ8IW19 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
APLFQ8IW19 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.26■□□□□ 0.51
APLFQ8IW19 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APLFQ8IW19 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
APLFQ8IW19 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
APLFQ8IW19 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APLFQ8IW19 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APLFQ8IW19 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
APLFQ8IW19 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
APLFQ8IW19 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.26■□□□□ 0.51
APLFQ8IW19 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.26■□□□□ 0.51
APLFQ8IW19 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
APLFQ8IW19 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.26■□□□□ 0.51
APLFQ8IW19 AC116351.2-201ENST00000606540 1585 ntBASIC18.25■□□□□ 0.51
APLFQ8IW19 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APLFQ8IW19 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms