Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.48□□□□□ -0.09
RAB5BP61020 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB5BP61020 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB5BP61020 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB5BP61020 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB5BP61020 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB5BP61020 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB5BP61020 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RAB5BP61020 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB5BP61020 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB5BP61020 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB5BP61020 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB5BP61020 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.48□□□□□ -0.09
RAB5BP61020 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB5BP61020 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RAB5BP61020 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RAB5BP61020 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB5BP61020 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RAB5BP61020 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RAB5BP61020 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
RAB5BP61020 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RAB5BP61020 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.47□□□□□ -0.09
RAB5BP61020 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.47□□□□□ -0.09
RAB5BP61020 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB5BP61020 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RAB5BP61020 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RAB5BP61020 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
RAB5BP61020 AC010980.1-201ENST00000587192 1142 ntBASIC14.47□□□□□ -0.09
RAB5BP61020 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.47□□□□□ -0.09
RAB5BP61020 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.47□□□□□ -0.09
RAB5BP61020 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RAB5BP61020 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RAB5BP61020 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB5BP61020 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB5BP61020 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 AC099063.4-201ENST00000641099 1602 ntBASIC14.47□□□□□ -0.09
RAB5BP61020 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB5BP61020 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB5BP61020 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RAB5BP61020 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RAB5BP61020 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB5BP61020 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB5BP61020 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB5BP61020 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB5BP61020 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB5BP61020 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB5BP61020 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB5BP61020 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB5BP61020 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB5BP61020 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB5BP61020 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB5BP61020 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB5BP61020 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB5BP61020 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB5BP61020 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB5BP61020 PVT1_1.1-201ENST00000615125 194 ntBASIC14.46□□□□□ -0.09
RAB5BP61020 AL117332.1-201ENST00000622628 974 ntBASIC14.46□□□□□ -0.09
RAB5BP61020 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB5BP61020 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB5BP61020 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB5BP61020 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB5BP61020 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB5BP61020 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.46□□□□□ -0.09
RAB5BP61020 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RAB5BP61020 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
RAB5BP61020 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.46□□□□□ -0.1
RAB5BP61020 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB5BP61020 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB5BP61020 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
RAB5BP61020 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB5BP61020 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB5BP61020 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB5BP61020 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.46□□□□□ -0.1
RAB5BP61020 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.46□□□□□ -0.1
RAB5BP61020 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB5BP61020 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5BP61020 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5BP61020 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
RAB5BP61020 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB5BP61020 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAB5BP61020 AP004607.4-201ENST00000530158 1459 ntBASIC14.45□□□□□ -0.1
RAB5BP61020 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms