Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH11P55287 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH11P55287 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDH11P55287 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH11P55287 HEIH-201ENST00000623091 1652 ntBASIC16.93■□□□□ 0.3
CDH11P55287 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH11P55287 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH11P55287 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CDH11P55287 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.93■□□□□ 0.3
CDH11P55287 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CDH11P55287 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH11P55287 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CDH11P55287 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.93■□□□□ 0.3
CDH11P55287 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH11P55287 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH11P55287 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH11P55287 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH11P55287 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH11P55287 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH11P55287 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH11P55287 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH11P55287 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH11P55287 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH11P55287 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH11P55287 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CDH11P55287 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.92■□□□□ 0.3
CDH11P55287 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH11P55287 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH11P55287 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH11P55287 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDH11P55287 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH11P55287 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH11P55287 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CDH11P55287 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CDH11P55287 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH11P55287 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CDH11P55287 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH11P55287 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH11P55287 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH11P55287 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDH11P55287 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH11P55287 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CDH11P55287 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH11P55287 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDH11P55287 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH11P55287 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CDH11P55287 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH11P55287 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH11P55287 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH11P55287 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.91■□□□□ 0.3
CDH11P55287 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH11P55287 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH11P55287 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH11P55287 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH11P55287 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH11P55287 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH11P55287 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH11P55287 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH11P55287 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH11P55287 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH11P55287 PKD1P1-201ENST00000458669 6805 ntBASIC16.9■□□□□ 0.3
CDH11P55287 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CDH11P55287 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH11P55287 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH11P55287 UNC93B2-201ENST00000285383 730 ntBASIC16.9■□□□□ 0.3
CDH11P55287 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH11P55287 RBM17P1-201ENST00000453646 1190 ntBASIC16.9■□□□□ 0.3
CDH11P55287 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH11P55287 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH11P55287 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH11P55287 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH11P55287 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH11P55287 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH11P55287 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH11P55287 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH11P55287 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.9■□□□□ 0.3
CDH11P55287 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH11P55287 REXO1L10P-201ENST00000615707 1290 ntBASIC16.9■□□□□ 0.3
CDH11P55287 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms