Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SLC1A1P43005 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A1P43005 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A1P43005 TSPY17P-201ENST00000450329 467 ntBASIC19.32■□□□□ 0.68
SLC1A1P43005 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.32■□□□□ 0.68
SLC1A1P43005 AP003071.4-201ENST00000562276 1284 ntBASIC19.32■□□□□ 0.68
SLC1A1P43005 AL353719.1-201ENST00000566847 864 ntBASIC19.32■□□□□ 0.68
SLC1A1P43005 Z99916.2-201ENST00000604037 246 ntBASIC19.32■□□□□ 0.68
SLC1A1P43005 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC1A1P43005 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A1P43005 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A1P43005 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A1P43005 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A1P43005 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
SLC1A1P43005 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A1P43005 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A1P43005 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SLC1A1P43005 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A1P43005 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A1P43005 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC1A1P43005 REXO1L9P-201ENST00000604264 2108 ntBASIC19.31■□□□□ 0.68
SLC1A1P43005 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A1P43005 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC1A1P43005 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC1A1P43005 UNC93B2-201ENST00000285383 730 ntBASIC19.31■□□□□ 0.68
SLC1A1P43005 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A1P43005 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
SLC1A1P43005 MIR149-201ENST00000384879 89 ntBASIC19.31■□□□□ 0.68
SLC1A1P43005 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.31■□□□□ 0.68
SLC1A1P43005 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SLC1A1P43005 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC1A1P43005 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A1P43005 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A1P43005 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SLC1A1P43005 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A1P43005 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC1A1P43005 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC1A1P43005 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A1P43005 AC009102.3-201ENST00000623118 1491 ntBASIC19.3■□□□□ 0.68
SLC1A1P43005 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
SLC1A1P43005 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC1A1P43005 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC1A1P43005 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC1A1P43005 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A1P43005 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC1A1P43005 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A1P43005 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC1A1P43005 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC1A1P43005 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC1A1P43005 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC1A1P43005 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC1A1P43005 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC1A1P43005 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A1P43005 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A1P43005 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SLC1A1P43005 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC1A1P43005 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC1A1P43005 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A1P43005 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
SLC1A1P43005 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC1A1P43005 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A1P43005 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A1P43005 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC1A1P43005 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC1A1P43005 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A1P43005 PCDHB18P-201ENST00000524813 2368 ntBASIC19.29■□□□□ 0.68
SLC1A1P43005 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A1P43005 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC1A1P43005 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A1P43005 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.29■□□□□ 0.68
SLC1A1P43005 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A1P43005 SDHAP2-201ENST00000455183 2001 ntBASIC19.29■□□□□ 0.68
SLC1A1P43005 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A1P43005 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A1P43005 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A1P43005 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A1P43005 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC1A1P43005 MIR718-201ENST00000390190 70 ntBASIC19.29■□□□□ 0.68
SLC1A1P43005 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.29■□□□□ 0.68
SLC1A1P43005 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.29■□□□□ 0.68
SLC1A1P43005 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A1P43005 WWOX-216ENST00000569818 525 ntBASIC19.29■□□□□ 0.68
SLC1A1P43005 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC1A1P43005 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC1A1P43005 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC1A1P43005 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A1P43005 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A1P43005 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A1P43005 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A1P43005 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC1A1P43005 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SLC1A1P43005 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A1P43005 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A1P43005 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SLC1A1P43005 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A1P43005 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A1P43005 AL096828.2-201ENST00000567259 1965 ntBASIC19.28■□□□□ 0.68
SLC1A1P43005 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A1P43005 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC1A1P43005 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms