Protein–RNA interactions for Protein: P42772

CDKN2B, Cyclin-dependent kinase 4 inhibitor B, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2BP42772 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDKN2BP42772 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKN2BP42772 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.08■□□□□ 0.65
CDKN2BP42772 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKN2BP42772 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKN2BP42772 KRT17P2-201ENST00000300992 1314 ntBASIC19.08■□□□□ 0.65
CDKN2BP42772 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKN2BP42772 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDKN2BP42772 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKN2BP42772 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKN2BP42772 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDKN2BP42772 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDKN2BP42772 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDKN2BP42772 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CDKN2BP42772 MIR149-201ENST00000384879 89 ntBASIC19.08■□□□□ 0.64
CDKN2BP42772 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDKN2BP42772 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.08■□□□□ 0.64
CDKN2BP42772 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDKN2BP42772 AC009102.3-201ENST00000623118 1491 ntBASIC19.08■□□□□ 0.64
CDKN2BP42772 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDKN2BP42772 AL096828.2-201ENST00000567259 1965 ntBASIC19.08■□□□□ 0.64
CDKN2BP42772 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDKN2BP42772 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDKN2BP42772 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CDKN2BP42772 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 PCDHB18P-201ENST00000524813 2368 ntBASIC19.07■□□□□ 0.64
CDKN2BP42772 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.07■□□□□ 0.64
CDKN2BP42772 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.07■□□□□ 0.64
CDKN2BP42772 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.07■□□□□ 0.64
CDKN2BP42772 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CDKN2BP42772 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.07■□□□□ 0.64
CDKN2BP42772 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.07■□□□□ 0.64
CDKN2BP42772 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CDKN2BP42772 TSPY14P-201ENST00000303979 915 ntBASIC19.07■□□□□ 0.64
CDKN2BP42772 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CDKN2BP42772 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 TSPY15P-201ENST00000457163 923 ntBASIC19.07■□□□□ 0.64
CDKN2BP42772 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.07■□□□□ 0.64
CDKN2BP42772 C2orf69P3-201ENST00000565542 1120 ntBASIC19.07■□□□□ 0.64
CDKN2BP42772 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.07■□□□□ 0.64
CDKN2BP42772 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.07■□□□□ 0.64
CDKN2BP42772 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.07■□□□□ 0.64
CDKN2BP42772 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKN2BP42772 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CDKN2BP42772 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.07■□□□□ 0.64
CDKN2BP42772 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.06■□□□□ 0.64
CDKN2BP42772 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
CDKN2BP42772 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDKN2BP42772 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 INGX-201ENST00000359239 846 ntBASIC19.06■□□□□ 0.64
CDKN2BP42772 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CDKN2BP42772 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.06■□□□□ 0.64
CDKN2BP42772 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.06■□□□□ 0.64
CDKN2BP42772 MIR4497-201ENST00000583208 89 ntBASIC19.06■□□□□ 0.64
CDKN2BP42772 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
CDKN2BP42772 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.06■□□□□ 0.64
CDKN2BP42772 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CDKN2BP42772 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDKN2BP42772 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKN2BP42772 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDKN2BP42772 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.05■□□□□ 0.64
CDKN2BP42772 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDKN2BP42772 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDKN2BP42772 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CDKN2BP42772 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.05■□□□□ 0.64
CDKN2BP42772 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.05■□□□□ 0.64
CDKN2BP42772 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.05■□□□□ 0.64
CDKN2BP42772 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms