Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCK1P35558 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCK1P35558 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.43■□□□□ 0.7
PCK1P35558 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCK1P35558 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PCK1P35558 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PCK1P35558 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.43■□□□□ 0.7
PCK1P35558 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCK1P35558 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.43■□□□□ 0.7
PCK1P35558 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCK1P35558 MIR3180-5-201ENST00000583743 153 ntBASIC19.43■□□□□ 0.7
PCK1P35558 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.43■□□□□ 0.7
PCK1P35558 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCK1P35558 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.43■□□□□ 0.7
PCK1P35558 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCK1P35558 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCK1P35558 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCK1P35558 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCK1P35558 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCK1P35558 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCK1P35558 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCK1P35558 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCK1P35558 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PCK1P35558 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
PCK1P35558 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.42■□□□□ 0.7
PCK1P35558 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCK1P35558 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCK1P35558 MIR1238-201ENST00000408483 83 ntBASIC19.42■□□□□ 0.7
PCK1P35558 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.42■□□□□ 0.7
PCK1P35558 AL390955.1-201ENST00000428694 934 ntBASIC19.42■□□□□ 0.7
PCK1P35558 CCR12P-201ENST00000446203 998 ntBASIC19.42■□□□□ 0.7
PCK1P35558 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.42■□□□□ 0.7
PCK1P35558 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.42■□□□□ 0.7
PCK1P35558 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.42■□□□□ 0.7
PCK1P35558 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.42■□□□□ 0.7
PCK1P35558 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.42■□□□□ 0.7
PCK1P35558 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.42■□□□□ 0.7
PCK1P35558 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.42■□□□□ 0.7
PCK1P35558 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
PCK1P35558 AC034236.2-201ENST00000606662 1610 ntBASIC19.42■□□□□ 0.7
PCK1P35558 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCK1P35558 BICD1-207ENST00000551848 1962 ntBASIC19.42■□□□□ 0.7
PCK1P35558 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.42■□□□□ 0.7
PCK1P35558 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCK1P35558 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.42■□□□□ 0.7
PCK1P35558 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCK1P35558 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCK1P35558 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.42■□□□□ 0.7
PCK1P35558 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.42■□□□□ 0.7
PCK1P35558 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCK1P35558 AC135050.7-201ENST00000624508 2218 ntBASIC19.41■□□□□ 0.7
PCK1P35558 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCK1P35558 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCK1P35558 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCK1P35558 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCK1P35558 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
PCK1P35558 MYLKP1-201ENST00000509077 1580 ntBASIC19.41■□□□□ 0.7
PCK1P35558 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCK1P35558 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCK1P35558 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCK1P35558 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PCK1P35558 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCK1P35558 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCK1P35558 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.41■□□□□ 0.7
PCK1P35558 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCK1P35558 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.41■□□□□ 0.7
PCK1P35558 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCK1P35558 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.41■□□□□ 0.7
PCK1P35558 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.41■□□□□ 0.7
PCK1P35558 AP000593.1-201ENST00000393668 712 ntBASIC19.41■□□□□ 0.7
PCK1P35558 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.41■□□□□ 0.7
PCK1P35558 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
PCK1P35558 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.41■□□□□ 0.7
PCK1P35558 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCK1P35558 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCK1P35558 AP003041.3-201ENST00000527151 707 ntBASIC19.41■□□□□ 0.7
PCK1P35558 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.41■□□□□ 0.7
PCK1P35558 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.41■□□□□ 0.7
PCK1P35558 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.41■□□□□ 0.7
PCK1P35558 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCK1P35558 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PCK1P35558 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCK1P35558 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCK1P35558 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCK1P35558 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCK1P35558 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCK1P35558 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCK1P35558 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCK1P35558 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCK1P35558 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.4■□□□□ 0.7
PCK1P35558 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCK1P35558 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.4■□□□□ 0.7
PCK1P35558 HTR7P1-202ENST00000624664 4411 ntBASIC19.4■□□□□ 0.7
PCK1P35558 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PCK1P35558 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.4■□□□□ 0.7
PCK1P35558 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.4■□□□□ 0.7
PCK1P35558 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.4■□□□□ 0.7
PCK1P35558 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.4■□□□□ 0.7
PCK1P35558 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCK1P35558 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms