Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.35
OPN1SWP03999 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.27■□□□□ 0.35
OPN1SWP03999 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.27■□□□□ 0.35
OPN1SWP03999 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
OPN1SWP03999 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
OPN1SWP03999 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OPN1SWP03999 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OPN1SWP03999 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
OPN1SWP03999 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OPN1SWP03999 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
OPN1SWP03999 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OPN1SWP03999 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OPN1SWP03999 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
OPN1SWP03999 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OPN1SWP03999 AL353807.1-201ENST00000427475 662 ntBASIC17.26■□□□□ 0.35
OPN1SWP03999 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OPN1SWP03999 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.26■□□□□ 0.35
OPN1SWP03999 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
OPN1SWP03999 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.26■□□□□ 0.35
OPN1SWP03999 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
OPN1SWP03999 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
OPN1SWP03999 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OPN1SWP03999 MYLKP1-201ENST00000509077 1580 ntBASIC17.26■□□□□ 0.35
OPN1SWP03999 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.26■□□□□ 0.35
OPN1SWP03999 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OPN1SWP03999 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
OPN1SWP03999 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
OPN1SWP03999 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
OPN1SWP03999 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
OPN1SWP03999 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.26■□□□□ 0.35
OPN1SWP03999 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
OPN1SWP03999 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OPN1SWP03999 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OPN1SWP03999 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
OPN1SWP03999 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
OPN1SWP03999 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.25■□□□□ 0.35
OPN1SWP03999 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
OPN1SWP03999 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.25■□□□□ 0.35
OPN1SWP03999 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.25■□□□□ 0.35
OPN1SWP03999 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.25■□□□□ 0.35
OPN1SWP03999 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
OPN1SWP03999 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 B3GAT3P1-201ENST00000471720 806 ntBASIC17.25■□□□□ 0.35
OPN1SWP03999 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
OPN1SWP03999 AC026271.3-201ENST00000571884 352 ntBASIC17.25■□□□□ 0.35
OPN1SWP03999 AF186192.3-201ENST00000583427 947 ntBASIC17.25■□□□□ 0.35
OPN1SWP03999 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.25■□□□□ 0.35
OPN1SWP03999 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.25■□□□□ 0.35
OPN1SWP03999 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.25■□□□□ 0.35
OPN1SWP03999 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
OPN1SWP03999 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.25■□□□□ 0.35
OPN1SWP03999 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.25■□□□□ 0.35
OPN1SWP03999 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
OPN1SWP03999 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
OPN1SWP03999 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.25■□□□□ 0.35
OPN1SWP03999 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OPN1SWP03999 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OPN1SWP03999 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OPN1SWP03999 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OPN1SWP03999 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OPN1SWP03999 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
OPN1SWP03999 AC134043.2-201ENST00000624206 2238 ntBASIC17.24■□□□□ 0.35
OPN1SWP03999 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OPN1SWP03999 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OPN1SWP03999 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.24■□□□□ 0.35
OPN1SWP03999 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.24■□□□□ 0.35
OPN1SWP03999 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
OPN1SWP03999 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
OPN1SWP03999 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.24■□□□□ 0.35
OPN1SWP03999 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
OPN1SWP03999 RPPH1-201ENST00000516869 333 ntBASIC17.24■□□□□ 0.35
OPN1SWP03999 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.24■□□□□ 0.35
OPN1SWP03999 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.24■□□□□ 0.35
OPN1SWP03999 MIR6786-201ENST00000616843 113 ntBASIC17.24■□□□□ 0.35
OPN1SWP03999 AC008622.2-201ENST00000617006 1229 ntBASIC17.24■□□□□ 0.35
OPN1SWP03999 AC130371.2-201ENST00000619443 611 ntBASIC17.24■□□□□ 0.35
OPN1SWP03999 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OPN1SWP03999 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.24■□□□□ 0.35
OPN1SWP03999 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
OPN1SWP03999 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms