Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 AC092850.2-201ENST00000623821 2697 ntBASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 AC097658.1-201ENST00000475555 843 ntBASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 PNMA6B-201ENST00000538162 1200 ntBASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 AC060766.5-201ENST00000590539 871 ntBASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 AL121829.2-201ENST00000620908 328 ntBASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf4Q9NQ89 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 AC067852.2-201ENST00000590513 2313 ntBASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C12orf4Q9NQ89 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C12orf4Q9NQ89 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
C12orf4Q9NQ89 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C12orf4Q9NQ89 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C12orf4Q9NQ89 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
C12orf4Q9NQ89 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C12orf4Q9NQ89 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
C12orf4Q9NQ89 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C12orf4Q9NQ89 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C12orf4Q9NQ89 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C12orf4Q9NQ89 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C12orf4Q9NQ89 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C12orf4Q9NQ89 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms