Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITCHQ96J02 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITCHQ96J02 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITCHQ96J02 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITCHQ96J02 AC093677.2-201ENST00000600169 1863 ntBASIC17.63■□□□□ 0.41
ITCHQ96J02 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITCHQ96J02 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
ITCHQ96J02 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITCHQ96J02 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ITCHQ96J02 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ITCHQ96J02 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITCHQ96J02 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ITCHQ96J02 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITCHQ96J02 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITCHQ96J02 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.63■□□□□ 0.41
ITCHQ96J02 AC008556.1-201ENST00000610908 2040 ntBASIC17.63■□□□□ 0.41
ITCHQ96J02 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
ITCHQ96J02 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ITCHQ96J02 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.63■□□□□ 0.41
ITCHQ96J02 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.63■□□□□ 0.41
ITCHQ96J02 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.63■□□□□ 0.41
ITCHQ96J02 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITCHQ96J02 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ITCHQ96J02 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.62■□□□□ 0.41
ITCHQ96J02 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITCHQ96J02 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.62■□□□□ 0.41
ITCHQ96J02 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ITCHQ96J02 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.62■□□□□ 0.41
ITCHQ96J02 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.62■□□□□ 0.41
ITCHQ96J02 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ITCHQ96J02 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITCHQ96J02 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.62■□□□□ 0.41
ITCHQ96J02 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITCHQ96J02 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITCHQ96J02 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITCHQ96J02 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITCHQ96J02 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITCHQ96J02 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITCHQ96J02 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.62■□□□□ 0.41
ITCHQ96J02 KRT18P6-201ENST00000555540 1265 ntBASIC17.62■□□□□ 0.41
ITCHQ96J02 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
ITCHQ96J02 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.62■□□□□ 0.41
ITCHQ96J02 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ITCHQ96J02 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITCHQ96J02 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.62■□□□□ 0.41
ITCHQ96J02 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITCHQ96J02 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ITCHQ96J02 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.62■□□□□ 0.41
ITCHQ96J02 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ITCHQ96J02 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ITCHQ96J02 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ITCHQ96J02 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITCHQ96J02 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.61■□□□□ 0.41
ITCHQ96J02 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.61■□□□□ 0.41
ITCHQ96J02 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ITCHQ96J02 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ITCHQ96J02 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
ITCHQ96J02 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITCHQ96J02 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITCHQ96J02 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITCHQ96J02 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITCHQ96J02 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.61■□□□□ 0.41
ITCHQ96J02 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
ITCHQ96J02 ID1-201ENST00000376105 1233 ntBASIC17.61■□□□□ 0.41
ITCHQ96J02 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.61■□□□□ 0.41
ITCHQ96J02 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.61■□□□□ 0.41
ITCHQ96J02 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ITCHQ96J02 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.61■□□□□ 0.41
ITCHQ96J02 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.61■□□□□ 0.41
ITCHQ96J02 KRT18P41-201ENST00000518924 1277 ntBASIC17.61■□□□□ 0.41
ITCHQ96J02 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.61■□□□□ 0.41
ITCHQ96J02 CR392000.1-201ENST00000624770 1228 ntBASIC17.61■□□□□ 0.41
ITCHQ96J02 AC073648.6-201ENST00000641589 218 ntBASIC17.61■□□□□ 0.41
ITCHQ96J02 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITCHQ96J02 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITCHQ96J02 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.61■□□□□ 0.41
ITCHQ96J02 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITCHQ96J02 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITCHQ96J02 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ITCHQ96J02 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.61■□□□□ 0.41
ITCHQ96J02 AL109659.2-201ENST00000606809 1674 ntBASIC17.61■□□□□ 0.41
ITCHQ96J02 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITCHQ96J02 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.61■□□□□ 0.41
ITCHQ96J02 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.61■□□□□ 0.41
ITCHQ96J02 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.61■□□□□ 0.41
ITCHQ96J02 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.61■□□□□ 0.41
ITCHQ96J02 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ITCHQ96J02 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.6■□□□□ 0.41
ITCHQ96J02 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
ITCHQ96J02 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ITCHQ96J02 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITCHQ96J02 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITCHQ96J02 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITCHQ96J02 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITCHQ96J02 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITCHQ96J02 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ITCHQ96J02 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITCHQ96J02 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ITCHQ96J02 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITCHQ96J02 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms