Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 AC022616.7-201ENST00000525383 220 ntBASIC18.93■□□□□ 0.62
RTL3Q8N8U3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 SDHAP2-201ENST00000455183 2001 ntBASIC18.93■□□□□ 0.62
RTL3Q8N8U3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.93■□□□□ 0.62
RTL3Q8N8U3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 AC092647.4-201ENST00000457211 535 ntBASIC18.92■□□□□ 0.62
RTL3Q8N8U3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 AC090164.3-201ENST00000610780 2143 ntBASIC18.92■□□□□ 0.62
RTL3Q8N8U3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.92■□□□□ 0.62
RTL3Q8N8U3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 FAM8A6P-201ENST00000407496 1135 ntBASIC18.91■□□□□ 0.62
RTL3Q8N8U3 KRT18P38-201ENST00000449496 1282 ntBASIC18.91■□□□□ 0.62
RTL3Q8N8U3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.91■□□□□ 0.62
RTL3Q8N8U3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL3Q8N8U3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms