Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNRPEP62304 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
SNRPEP62304 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNRPEP62304 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNRPEP62304 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNRPEP62304 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SNRPEP62304 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNRPEP62304 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNRPEP62304 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNRPEP62304 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNRPEP62304 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNRPEP62304 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
SNRPEP62304 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SNRPEP62304 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.21□□□□□ -0.13
SNRPEP62304 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
SNRPEP62304 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNRPEP62304 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNRPEP62304 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNRPEP62304 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNRPEP62304 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SNRPEP62304 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.21□□□□□ -0.14
SNRPEP62304 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNRPEP62304 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
SNRPEP62304 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
SNRPEP62304 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNRPEP62304 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNRPEP62304 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNRPEP62304 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.21□□□□□ -0.14
SNRPEP62304 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SNRPEP62304 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.2□□□□□ -0.14
SNRPEP62304 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.2□□□□□ -0.14
SNRPEP62304 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.2□□□□□ -0.14
SNRPEP62304 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SNRPEP62304 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SNRPEP62304 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 METRNL-202ENST00000570778 967 ntTSL 5 BASIC14.2□□□□□ -0.14
SNRPEP62304 THA1P-201ENST00000590384 1145 ntBASIC14.2□□□□□ -0.14
SNRPEP62304 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SNRPEP62304 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.2□□□□□ -0.14
SNRPEP62304 AC144831.1-201ENST00000573312 2656 ntBASIC14.2□□□□□ -0.14
SNRPEP62304 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.2□□□□□ -0.14
SNRPEP62304 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.2□□□□□ -0.14
SNRPEP62304 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNRPEP62304 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
SNRPEP62304 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
SNRPEP62304 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
SNRPEP62304 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.19□□□□□ -0.14
SNRPEP62304 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
SNRPEP62304 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.19□□□□□ -0.14
SNRPEP62304 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
SNRPEP62304 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.19□□□□□ -0.14
SNRPEP62304 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.19□□□□□ -0.14
SNRPEP62304 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.19□□□□□ -0.14
SNRPEP62304 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SNRPEP62304 AL451085.2-201ENST00000605085 799 ntBASIC14.19□□□□□ -0.14
SNRPEP62304 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.19□□□□□ -0.14
SNRPEP62304 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.19□□□□□ -0.14
SNRPEP62304 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.19□□□□□ -0.14
SNRPEP62304 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.19□□□□□ -0.14
SNRPEP62304 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SNRPEP62304 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNRPEP62304 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNRPEP62304 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms