Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL512353.2-201ENST00000448759 1962 ntBASIC18.44■□□□□ 0.54
XRCC1P18887 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.44■□□□□ 0.54
XRCC1P18887 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
XRCC1P18887 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.44■□□□□ 0.54
XRCC1P18887 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
XRCC1P18887 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.44■□□□□ 0.54
XRCC1P18887 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
XRCC1P18887 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
XRCC1P18887 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.43■□□□□ 0.54
XRCC1P18887 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
XRCC1P18887 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
XRCC1P18887 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.43■□□□□ 0.54
XRCC1P18887 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
XRCC1P18887 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
XRCC1P18887 AK4P3-201ENST00000418260 669 ntBASIC18.43■□□□□ 0.54
XRCC1P18887 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.43■□□□□ 0.54
XRCC1P18887 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
XRCC1P18887 COX11P1-201ENST00000489116 835 ntBASIC18.43■□□□□ 0.54
XRCC1P18887 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.43■□□□□ 0.54
XRCC1P18887 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.43■□□□□ 0.54
XRCC1P18887 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
XRCC1P18887 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.43■□□□□ 0.54
XRCC1P18887 AL031432.5-201ENST00000641059 760 ntBASIC18.43■□□□□ 0.54
XRCC1P18887 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
XRCC1P18887 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.43■□□□□ 0.54
XRCC1P18887 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
XRCC1P18887 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.43■□□□□ 0.54
XRCC1P18887 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
XRCC1P18887 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
XRCC1P18887 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
XRCC1P18887 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
XRCC1P18887 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
XRCC1P18887 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
XRCC1P18887 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.43■□□□□ 0.54
XRCC1P18887 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
XRCC1P18887 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
XRCC1P18887 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.42■□□□□ 0.54
XRCC1P18887 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC1P18887 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.42■□□□□ 0.54
XRCC1P18887 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
XRCC1P18887 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC1P18887 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC1P18887 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
XRCC1P18887 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.42■□□□□ 0.54
XRCC1P18887 AC117947.1-201ENST00000427448 529 ntBASIC18.42■□□□□ 0.54
XRCC1P18887 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
XRCC1P18887 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
XRCC1P18887 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.42■□□□□ 0.54
XRCC1P18887 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC1P18887 AC008622.2-201ENST00000617006 1229 ntBASIC18.42■□□□□ 0.54
XRCC1P18887 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC1P18887 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC1P18887 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC1P18887 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC1P18887 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC1P18887 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC1P18887 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
XRCC1P18887 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.42■□□□□ 0.54
XRCC1P18887 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC1P18887 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC1P18887 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.42■□□□□ 0.54
XRCC1P18887 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.42■□□□□ 0.54
XRCC1P18887 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
XRCC1P18887 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.41■□□□□ 0.54
XRCC1P18887 KRT8P45-201ENST00000414328 1447 ntBASIC18.41■□□□□ 0.54
XRCC1P18887 KRT8P3-201ENST00000519669 1449 ntBASIC18.41■□□□□ 0.54
XRCC1P18887 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC1P18887 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC1P18887 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC1P18887 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.41■□□□□ 0.54
XRCC1P18887 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC1P18887 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.41■□□□□ 0.54
XRCC1P18887 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC1P18887 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
XRCC1P18887 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC1P18887 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.41■□□□□ 0.54
XRCC1P18887 AC020916.1-201ENST00000587762 1774 ntBASIC18.41■□□□□ 0.54
XRCC1P18887 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.41■□□□□ 0.54
XRCC1P18887 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC1P18887 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.41■□□□□ 0.54
XRCC1P18887 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms