Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GCFC2P16383 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
GCFC2P16383 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
GCFC2P16383 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
GCFC2P16383 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GCFC2P16383 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GCFC2P16383 KRT18P38-201ENST00000449496 1282 ntBASIC20.87■□□□□ 0.93
GCFC2P16383 AL359075.1-203ENST00000462729 1002 ntBASIC20.87■□□□□ 0.93
GCFC2P16383 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.87■□□□□ 0.93
GCFC2P16383 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GCFC2P16383 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.87■□□□□ 0.93
GCFC2P16383 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GCFC2P16383 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GCFC2P16383 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.87■□□□□ 0.93
GCFC2P16383 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GCFC2P16383 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GCFC2P16383 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.87■□□□□ 0.93
GCFC2P16383 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GCFC2P16383 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GCFC2P16383 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.86■□□□□ 0.93
GCFC2P16383 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.86■□□□□ 0.93
GCFC2P16383 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GCFC2P16383 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GCFC2P16383 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GCFC2P16383 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
GCFC2P16383 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GCFC2P16383 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GCFC2P16383 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.86■□□□□ 0.93
GCFC2P16383 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.86■□□□□ 0.93
GCFC2P16383 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.86■□□□□ 0.93
GCFC2P16383 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.86■□□□□ 0.93
GCFC2P16383 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.86■□□□□ 0.93
GCFC2P16383 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
GCFC2P16383 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
GCFC2P16383 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.86■□□□□ 0.93
GCFC2P16383 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.86■□□□□ 0.93
GCFC2P16383 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
GCFC2P16383 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
GCFC2P16383 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GCFC2P16383 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GCFC2P16383 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GCFC2P16383 AC005082.1-201ENST00000413042 2259 ntBASIC20.85■□□□□ 0.93
GCFC2P16383 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
GCFC2P16383 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.85■□□□□ 0.93
GCFC2P16383 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
GCFC2P16383 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GCFC2P16383 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.85■□□□□ 0.93
GCFC2P16383 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
GCFC2P16383 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.85■□□□□ 0.93
GCFC2P16383 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GCFC2P16383 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
GCFC2P16383 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GCFC2P16383 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
GCFC2P16383 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.85■□□□□ 0.93
GCFC2P16383 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
GCFC2P16383 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
GCFC2P16383 AL590326.2-201ENST00000625139 305 ntBASIC20.85■□□□□ 0.93
GCFC2P16383 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.85■□□□□ 0.93
GCFC2P16383 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.85■□□□□ 0.93
GCFC2P16383 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.85■□□□□ 0.93
GCFC2P16383 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
GCFC2P16383 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
GCFC2P16383 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
GCFC2P16383 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GCFC2P16383 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
GCFC2P16383 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GCFC2P16383 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.84■□□□□ 0.93
GCFC2P16383 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.84■□□□□ 0.93
GCFC2P16383 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
GCFC2P16383 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.84■□□□□ 0.93
GCFC2P16383 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.84■□□□□ 0.93
GCFC2P16383 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.84■□□□□ 0.93
GCFC2P16383 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.84■□□□□ 0.93
GCFC2P16383 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.84■□□□□ 0.93
GCFC2P16383 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
GCFC2P16383 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
GCFC2P16383 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GCFC2P16383 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.84■□□□□ 0.93
GCFC2P16383 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.83■□□□□ 0.93
GCFC2P16383 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GCFC2P16383 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GCFC2P16383 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GCFC2P16383 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms