Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.16■□□□□ 0.66
IFNB1P01574 KRT8P45-201ENST00000414328 1447 ntBASIC19.16■□□□□ 0.66
IFNB1P01574 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNB1P01574 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
IFNB1P01574 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.16■□□□□ 0.66
IFNB1P01574 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFNB1P01574 NOC2LP2-201ENST00000407594 1944 ntBASIC19.15■□□□□ 0.66
IFNB1P01574 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IFNB1P01574 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.15■□□□□ 0.66
IFNB1P01574 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
IFNB1P01574 FZD10-202ENST00000539839 3282 ntBASIC19.15■□□□□ 0.66
IFNB1P01574 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.15■□□□□ 0.66
IFNB1P01574 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFNB1P01574 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.15■□□□□ 0.66
IFNB1P01574 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
IFNB1P01574 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
IFNB1P01574 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.15■□□□□ 0.66
IFNB1P01574 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
IFNB1P01574 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
IFNB1P01574 KRT18P29-201ENST00000397031 1267 ntBASIC19.15■□□□□ 0.66
IFNB1P01574 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.15■□□□□ 0.66
IFNB1P01574 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IFNB1P01574 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
IFNB1P01574 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.15■□□□□ 0.66
IFNB1P01574 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.15■□□□□ 0.66
IFNB1P01574 PCDHB18P-201ENST00000524813 2368 ntBASIC19.15■□□□□ 0.66
IFNB1P01574 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.15■□□□□ 0.66
IFNB1P01574 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
IFNB1P01574 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFNB1P01574 AC008556.1-201ENST00000610908 2040 ntBASIC19.15■□□□□ 0.66
IFNB1P01574 FSCN1P1-201ENST00000568912 1481 ntBASIC19.15■□□□□ 0.66
IFNB1P01574 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.15■□□□□ 0.66
IFNB1P01574 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IFNB1P01574 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFNB1P01574 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFNB1P01574 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
IFNB1P01574 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
IFNB1P01574 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.14■□□□□ 0.65
IFNB1P01574 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFNB1P01574 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IFNB1P01574 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFNB1P01574 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IFNB1P01574 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.14■□□□□ 0.65
IFNB1P01574 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.14■□□□□ 0.65
IFNB1P01574 TSPY20P-201ENST00000450910 630 ntBASIC19.14■□□□□ 0.65
IFNB1P01574 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.14■□□□□ 0.65
IFNB1P01574 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.14■□□□□ 0.65
IFNB1P01574 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.14■□□□□ 0.65
IFNB1P01574 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.14■□□□□ 0.65
IFNB1P01574 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.14■□□□□ 0.65
IFNB1P01574 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.14■□□□□ 0.65
IFNB1P01574 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.14■□□□□ 0.65
IFNB1P01574 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.14■□□□□ 0.65
IFNB1P01574 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
IFNB1P01574 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFNB1P01574 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
IFNB1P01574 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
IFNB1P01574 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.14■□□□□ 0.65
IFNB1P01574 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFNB1P01574 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFNB1P01574 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IFNB1P01574 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFNB1P01574 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFNB1P01574 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFNB1P01574 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFNB1P01574 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
IFNB1P01574 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
IFNB1P01574 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFNB1P01574 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
IFNB1P01574 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.13■□□□□ 0.65
IFNB1P01574 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.13■□□□□ 0.65
IFNB1P01574 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.13■□□□□ 0.65
IFNB1P01574 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
IFNB1P01574 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.13■□□□□ 0.65
IFNB1P01574 CD177P1-201ENST00000606252 935 ntBASIC19.13■□□□□ 0.65
IFNB1P01574 AP000692.2-201ENST00000608391 879 ntBASIC19.13■□□□□ 0.65
IFNB1P01574 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFNB1P01574 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFNB1P01574 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
IFNB1P01574 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFNB1P01574 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
IFNB1P01574 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFNB1P01574 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.13■□□□□ 0.65
IFNB1P01574 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.13■□□□□ 0.65
IFNB1P01574 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFNB1P01574 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
IFNB1P01574 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFNB1P01574 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
IFNB1P01574 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
IFNB1P01574 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
IFNB1P01574 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IFNB1P01574 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
IFNB1P01574 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFNB1P01574 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFNB1P01574 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFNB1P01574 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFNB1P01574 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
IFNB1P01574 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFNB1P01574 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IFNB1P01574 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms