Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX4O00257 AC093525.10-201ENST00000625130 1569 ntBASIC18.89■□□□□ 0.61
CBX4O00257 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.89■□□□□ 0.61
CBX4O00257 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CBX4O00257 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX4O00257 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX4O00257 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX4O00257 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX4O00257 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX4O00257 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.88■□□□□ 0.61
CBX4O00257 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX4O00257 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX4O00257 AP000593.1-201ENST00000393668 712 ntBASIC18.88■□□□□ 0.61
CBX4O00257 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX4O00257 KRT18P56-201ENST00000507275 550 ntBASIC18.88■□□□□ 0.61
CBX4O00257 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX4O00257 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.88■□□□□ 0.61
CBX4O00257 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX4O00257 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX4O00257 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX4O00257 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX4O00257 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.88■□□□□ 0.61
CBX4O00257 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX4O00257 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX4O00257 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.88■□□□□ 0.61
CBX4O00257 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CBX4O00257 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
CBX4O00257 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX4O00257 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.88■□□□□ 0.61
CBX4O00257 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX4O00257 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX4O00257 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX4O00257 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CBX4O00257 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX4O00257 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.87■□□□□ 0.61
CBX4O00257 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX4O00257 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX4O00257 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX4O00257 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CBX4O00257 AC092597.1-201ENST00000487352 616 ntBASIC18.87■□□□□ 0.61
CBX4O00257 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CBX4O00257 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CBX4O00257 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.87■□□□□ 0.61
CBX4O00257 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.87■□□□□ 0.61
CBX4O00257 AC112777.1-201ENST00000540175 1423 ntBASIC18.87■□□□□ 0.61
CBX4O00257 AL031598.1-201ENST00000561511 1773 ntBASIC18.87■□□□□ 0.61
CBX4O00257 LINC01311-201ENST00000565162 1445 ntBASIC18.87■□□□□ 0.61
CBX4O00257 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.87■□□□□ 0.61
CBX4O00257 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.87■□□□□ 0.61
CBX4O00257 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CBX4O00257 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CBX4O00257 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.87■□□□□ 0.61
CBX4O00257 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.87■□□□□ 0.61
CBX4O00257 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CBX4O00257 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CBX4O00257 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CBX4O00257 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX4O00257 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.86■□□□□ 0.61
CBX4O00257 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.86■□□□□ 0.61
CBX4O00257 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CBX4O00257 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.86■□□□□ 0.61
CBX4O00257 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
CBX4O00257 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
CBX4O00257 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 TNXA-203ENST00000507684 2038 ntBASIC18.86■□□□□ 0.61
CBX4O00257 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX4O00257 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CBX4O00257 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX4O00257 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX4O00257 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.85■□□□□ 0.61
CBX4O00257 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX4O00257 MYLKP1-201ENST00000509077 1580 ntBASIC18.85■□□□□ 0.61
CBX4O00257 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.85■□□□□ 0.61
CBX4O00257 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX4O00257 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.85■□□□□ 0.61
CBX4O00257 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CBX4O00257 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CBX4O00257 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.85■□□□□ 0.61
CBX4O00257 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.85■□□□□ 0.61
CBX4O00257 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.85■□□□□ 0.61
CBX4O00257 MIR3180-4-201ENST00000582223 153 ntBASIC18.85■□□□□ 0.61
CBX4O00257 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX4O00257 HYMAI.1-201ENST00000620949 238 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms