Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYRM9A8MSI8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYRM9A8MSI8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYRM9A8MSI8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYRM9A8MSI8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYRM9A8MSI8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.2□□□□□ -0.3
LYRM9A8MSI8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LYRM9A8MSI8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYRM9A8MSI8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYRM9A8MSI8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYRM9A8MSI8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.2□□□□□ -0.3
LYRM9A8MSI8 AC098818.2-201ENST00000564925 2320 ntBASIC13.19□□□□□ -0.3
LYRM9A8MSI8 AL163051.1-201ENST00000569214 1512 ntBASIC13.19□□□□□ -0.3
LYRM9A8MSI8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 STARP1-201ENST00000397973 869 ntBASIC13.19□□□□□ -0.3
LYRM9A8MSI8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 DUX4L26-201ENST00000489078 1255 ntBASIC13.19□□□□□ -0.3
LYRM9A8MSI8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 AL049597.2-201ENST00000565575 961 ntBASIC13.19□□□□□ -0.3
LYRM9A8MSI8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 AC008687.5-201ENST00000593746 558 ntBASIC13.19□□□□□ -0.3
LYRM9A8MSI8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LYRM9A8MSI8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 FAM8A6P-201ENST00000407496 1135 ntBASIC13.18□□□□□ -0.3
LYRM9A8MSI8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 AC104076.2-201ENST00000448912 469 ntBASIC13.18□□□□□ -0.3
LYRM9A8MSI8 AC063952.2-201ENST00000498792 1227 ntBASIC13.18□□□□□ -0.3
LYRM9A8MSI8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 AL590326.2-201ENST00000625139 305 ntBASIC13.18□□□□□ -0.3
LYRM9A8MSI8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.18□□□□□ -0.3
LYRM9A8MSI8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LYRM9A8MSI8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
LYRM9A8MSI8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYRM9A8MSI8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.17□□□□□ -0.3
LYRM9A8MSI8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LYRM9A8MSI8 AC009102.3-201ENST00000623118 1491 ntBASIC13.17□□□□□ -0.3
LYRM9A8MSI8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYRM9A8MSI8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYRM9A8MSI8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYRM9A8MSI8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LYRM9A8MSI8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
LYRM9A8MSI8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYRM9A8MSI8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYRM9A8MSI8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LYRM9A8MSI8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms