Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
A0A1W2PRF3 AL031432.5-201ENST00000641059 760 ntBASIC15.21■□□□□ 0.03
A0A1W2PRF3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
A0A1W2PRF3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.21■□□□□ 0.03
A0A1W2PRF3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.21■□□□□ 0.03
A0A1W2PRF3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
A0A1W2PRF3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
A0A1W2PRF3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
A0A1W2PRF3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
A0A1W2PRF3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.2■□□□□ 0.02
A0A1W2PRF3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
A0A1W2PRF3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.2■□□□□ 0.02
A0A1W2PRF3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
A0A1W2PRF3 AP000523.1-201ENST00000398242 1049 ntBASIC15.2■□□□□ 0.02
A0A1W2PRF3 KRT18P23-201ENST00000435622 1283 ntBASIC15.2■□□□□ 0.02
A0A1W2PRF3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.2■□□□□ 0.02
A0A1W2PRF3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.2■□□□□ 0.02
A0A1W2PRF3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
A0A1W2PRF3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
A0A1W2PRF3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
A0A1W2PRF3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.2■□□□□ 0.02
A0A1W2PRF3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.2■□□□□ 0.02
A0A1W2PRF3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
A0A1W2PRF3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.2■□□□□ 0.02
A0A1W2PRF3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
A0A1W2PRF3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 AL109659.2-201ENST00000606809 1674 ntBASIC15.19■□□□□ 0.02
A0A1W2PRF3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 AC112497.1-201ENST00000624824 639 ntBASIC15.19■□□□□ 0.02
A0A1W2PRF3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
A0A1W2PRF3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.19■□□□□ 0.02
A0A1W2PRF3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
A0A1W2PRF3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
A0A1W2PRF3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
A0A1W2PRF3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.18■□□□□ 0.02
A0A1W2PRF3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
A0A1W2PRF3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.18■□□□□ 0.02
A0A1W2PRF3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
A0A1W2PRF3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
A0A1W2PRF3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms