Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC6Q9Y625 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.53■□□□□ 0.4
GPC6Q9Y625 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC6Q9Y625 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GPC6Q9Y625 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.53■□□□□ 0.4
GPC6Q9Y625 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GPC6Q9Y625 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC6Q9Y625 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.53■□□□□ 0.4
GPC6Q9Y625 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.53■□□□□ 0.4
GPC6Q9Y625 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.53■□□□□ 0.4
GPC6Q9Y625 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.53■□□□□ 0.4
GPC6Q9Y625 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.53■□□□□ 0.4
GPC6Q9Y625 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.53■□□□□ 0.4
GPC6Q9Y625 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
GPC6Q9Y625 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
GPC6Q9Y625 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC6Q9Y625 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC6Q9Y625 BICD1-207ENST00000551848 1962 ntBASIC17.53■□□□□ 0.4
GPC6Q9Y625 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.53■□□□□ 0.4
GPC6Q9Y625 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GPC6Q9Y625 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC6Q9Y625 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC6Q9Y625 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GPC6Q9Y625 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.52■□□□□ 0.4
GPC6Q9Y625 HEIH-201ENST00000623091 1652 ntBASIC17.52■□□□□ 0.4
GPC6Q9Y625 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.52■□□□□ 0.4
GPC6Q9Y625 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC6Q9Y625 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.52■□□□□ 0.4
GPC6Q9Y625 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
GPC6Q9Y625 MIR718-201ENST00000390190 70 ntBASIC17.52■□□□□ 0.4
GPC6Q9Y625 RPS2P55-201ENST00000397318 883 ntBASIC17.52■□□□□ 0.4
GPC6Q9Y625 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GPC6Q9Y625 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.52■□□□□ 0.4
GPC6Q9Y625 AC107956.1-201ENST00000494359 873 ntBASIC17.52■□□□□ 0.4
GPC6Q9Y625 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.52■□□□□ 0.4
GPC6Q9Y625 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.52■□□□□ 0.4
GPC6Q9Y625 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.52■□□□□ 0.4
GPC6Q9Y625 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.52■□□□□ 0.4
GPC6Q9Y625 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.52■□□□□ 0.4
GPC6Q9Y625 AC131212.4-201ENST00000623606 975 ntBASIC17.52■□□□□ 0.4
GPC6Q9Y625 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.52■□□□□ 0.4
GPC6Q9Y625 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.52■□□□□ 0.4
GPC6Q9Y625 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GPC6Q9Y625 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GPC6Q9Y625 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.52■□□□□ 0.39
GPC6Q9Y625 RCC2P6-201ENST00000526625 1557 ntBASIC17.52■□□□□ 0.39
GPC6Q9Y625 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GPC6Q9Y625 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
GPC6Q9Y625 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
GPC6Q9Y625 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
GPC6Q9Y625 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GPC6Q9Y625 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GPC6Q9Y625 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC6Q9Y625 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC6Q9Y625 AC068880.1-201ENST00000507289 2297 ntBASIC17.51■□□□□ 0.39
GPC6Q9Y625 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.51■□□□□ 0.39
GPC6Q9Y625 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.51■□□□□ 0.39
GPC6Q9Y625 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC6Q9Y625 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.51■□□□□ 0.39
GPC6Q9Y625 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
GPC6Q9Y625 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC6Q9Y625 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.51■□□□□ 0.39
GPC6Q9Y625 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC6Q9Y625 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC6Q9Y625 KRT16P1-201ENST00000399124 1418 ntBASIC17.51■□□□□ 0.39
GPC6Q9Y625 KRT8P11-201ENST00000409686 1436 ntBASIC17.51■□□□□ 0.39
GPC6Q9Y625 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC6Q9Y625 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.51■□□□□ 0.39
GPC6Q9Y625 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.51■□□□□ 0.39
GPC6Q9Y625 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC6Q9Y625 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GPC6Q9Y625 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.51■□□□□ 0.39
GPC6Q9Y625 AC233702.5-201ENST00000584107 538 ntBASIC17.51■□□□□ 0.39
GPC6Q9Y625 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.51■□□□□ 0.39
GPC6Q9Y625 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC6Q9Y625 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC6Q9Y625 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC6Q9Y625 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.51■□□□□ 0.39
GPC6Q9Y625 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC6Q9Y625 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC6Q9Y625 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC6Q9Y625 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC6Q9Y625 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC6Q9Y625 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
GPC6Q9Y625 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GPC6Q9Y625 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
GPC6Q9Y625 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GPC6Q9Y625 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
GPC6Q9Y625 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
GPC6Q9Y625 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms