Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 AL109659.2-201ENST00000606809 1674 ntBASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 AC073592.3-201ENST00000625118 1834 ntBASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GTF3C4Q9UKN8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 AL359075.1-203ENST00000462729 1002 ntBASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF3C4Q9UKN8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 BICD1-207ENST00000551848 1962 ntBASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 HOMER2P1-201ENST00000455653 964 ntBASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
GTF3C4Q9UKN8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
GTF3C4Q9UKN8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.78
GTF3C4Q9UKN8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF3C4Q9UKN8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms