Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 AP000523.1-201ENST00000398242 1049 ntBASIC16.19■□□□□ 0.18
CDH20Q9HBT6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 WWOX-216ENST00000569818 525 ntBASIC16.19■□□□□ 0.18
CDH20Q9HBT6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH20Q9HBT6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.18■□□□□ 0.18
CDH20Q9HBT6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 TNXA-203ENST00000507684 2038 ntBASIC16.18■□□□□ 0.18
CDH20Q9HBT6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 MIR564-202ENST00000385049 94 ntBASIC16.18■□□□□ 0.18
CDH20Q9HBT6 AC005521.1-201ENST00000393351 872 ntBASIC16.18■□□□□ 0.18
CDH20Q9HBT6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 AC009947.2-201ENST00000444014 672 ntBASIC16.18■□□□□ 0.18
CDH20Q9HBT6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 MTMR9LP-203ENST00000426597 1545 ntBASIC16.18■□□□□ 0.18
CDH20Q9HBT6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH20Q9HBT6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 AL357033.4-201ENST00000617703 1807 ntBASIC16.17■□□□□ 0.18
CDH20Q9HBT6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 AC034236.2-201ENST00000606662 1610 ntBASIC16.17■□□□□ 0.18
CDH20Q9HBT6 TERF1P1-201ENST00000311003 1181 ntBASIC16.17■□□□□ 0.18
CDH20Q9HBT6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms