Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.67■□□□□ 0.42
NDC1Q9BTX1 FAM86EP-206ENST00000510506 987 ntBASIC17.67■□□□□ 0.42
NDC1Q9BTX1 MIR3917-201ENST00000580971 93 ntBASIC17.67■□□□□ 0.42
NDC1Q9BTX1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 AC020763.4-201ENST00000623414 4170 ntBASIC17.67■□□□□ 0.42
NDC1Q9BTX1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 AC006333.2-201ENST00000607957 2099 ntBASIC17.67■□□□□ 0.42
NDC1Q9BTX1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.67■□□□□ 0.42
NDC1Q9BTX1 IER3-202ENST00000376377 1350 ntBASIC17.66■□□□□ 0.42
NDC1Q9BTX1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 AC104390.1-201ENST00000555663 520 ntBASIC17.66■□□□□ 0.42
NDC1Q9BTX1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 AL136038.3-201ENST00000561909 1096 ntBASIC17.66■□□□□ 0.42
NDC1Q9BTX1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 AL157888.1-201ENST00000631930 593 ntBASIC17.66■□□□□ 0.42
NDC1Q9BTX1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NDC1Q9BTX1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 UPK3BP1-201ENST00000428678 509 ntBASIC17.65■□□□□ 0.42
NDC1Q9BTX1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 AC010240.3-201ENST00000607688 395 ntBASIC17.65■□□□□ 0.42
NDC1Q9BTX1 AC083849.1-201ENST00000615227 514 ntBASIC17.65■□□□□ 0.42
NDC1Q9BTX1 HYMAI.1-201ENST00000620949 238 ntBASIC17.65■□□□□ 0.42
NDC1Q9BTX1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDC1Q9BTX1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms