Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CMSS1Q9BQ75 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CMSS1Q9BQ75 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CMSS1Q9BQ75 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
CMSS1Q9BQ75 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CMSS1Q9BQ75 KRT8P41-201ENST00000533985 1514 ntBASIC15.84■□□□□ 0.13
CMSS1Q9BQ75 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.84■□□□□ 0.13
CMSS1Q9BQ75 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CMSS1Q9BQ75 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CMSS1Q9BQ75 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CMSS1Q9BQ75 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
CMSS1Q9BQ75 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CMSS1Q9BQ75 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.83■□□□□ 0.13
CMSS1Q9BQ75 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CMSS1Q9BQ75 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.83■□□□□ 0.13
CMSS1Q9BQ75 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
CMSS1Q9BQ75 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CMSS1Q9BQ75 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.83■□□□□ 0.13
CMSS1Q9BQ75 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CMSS1Q9BQ75 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CMSS1Q9BQ75 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CMSS1Q9BQ75 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CMSS1Q9BQ75 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
CMSS1Q9BQ75 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 MYC-208ENST00000641036 567 ntBASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
CMSS1Q9BQ75 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms