Protein–RNA interactions for Protein: Q8NEG5

ZSWIM2, E3 ubiquitin-protein ligase ZSWIM2, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM2Q8NEG5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ZSWIM2Q8NEG5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 AL163051.1-201ENST00000569214 1512 ntBASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 RNF152P1-201ENST00000397754 604 ntBASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 AC079602.3-201ENST00000623931 403 ntBASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZSWIM2Q8NEG5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 AL359075.1-203ENST00000462729 1002 ntBASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 SDHAP2-201ENST00000455183 2001 ntBASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ZSWIM2Q8NEG5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 MIR3917-201ENST00000580971 93 ntBASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.12■□□□□ 0.81
ZSWIM2Q8NEG5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ZSWIM2Q8NEG5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.11■□□□□ 0.81
ZSWIM2Q8NEG5 KRT8P7-201ENST00000533003 1432 ntBASIC20.11■□□□□ 0.81
ZSWIM2Q8NEG5 AC073592.3-201ENST00000625118 1834 ntBASIC20.11■□□□□ 0.81
ZSWIM2Q8NEG5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ZSWIM2Q8NEG5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.11■□□□□ 0.81
ZSWIM2Q8NEG5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZSWIM2Q8NEG5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZSWIM2Q8NEG5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZSWIM2Q8NEG5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZSWIM2Q8NEG5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.11■□□□□ 0.81
ZSWIM2Q8NEG5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.11■□□□□ 0.81
ZSWIM2Q8NEG5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZSWIM2Q8NEG5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZSWIM2Q8NEG5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ZSWIM2Q8NEG5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms