Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
TMEM53Q6P2H8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TMEM53Q6P2H8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.96■□□□□ 0.3
TMEM53Q6P2H8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 AC098590.1-201ENST00000468126 897 ntBASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 HTR7P1-201ENST00000538670 1336 ntBASIC16.95■□□□□ 0.3
TMEM53Q6P2H8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 AL135905.2-201ENST00000584934 1404 ntBASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM53Q6P2H8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 ZNF815P-204ENST00000434898 1737 ntBASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM53Q6P2H8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms