Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SGO1Q5FBB7 ABHD17AP1-201ENST00000358206 933 ntBASIC18.02■□□□□ 0.48
SGO1Q5FBB7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SGO1Q5FBB7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SGO1Q5FBB7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SGO1Q5FBB7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SGO1Q5FBB7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SGO1Q5FBB7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SGO1Q5FBB7 AC008622.2-201ENST00000617006 1229 ntBASIC18.02■□□□□ 0.48
SGO1Q5FBB7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SGO1Q5FBB7 AC113410.3-201ENST00000623366 203 ntBASIC18.02■□□□□ 0.48
SGO1Q5FBB7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SGO1Q5FBB7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SGO1Q5FBB7 AC073592.3-201ENST00000625118 1834 ntBASIC18.02■□□□□ 0.47
SGO1Q5FBB7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SGO1Q5FBB7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SGO1Q5FBB7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.02■□□□□ 0.47
SGO1Q5FBB7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 MFAP1P1-201ENST00000442257 1255 ntBASIC18.01■□□□□ 0.47
SGO1Q5FBB7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 NUDT16P1-203ENST00000513809 620 ntBASIC18.01■□□□□ 0.47
SGO1Q5FBB7 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.01■□□□□ 0.47
SGO1Q5FBB7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18■□□□□ 0.47
SGO1Q5FBB7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18■□□□□ 0.47
SGO1Q5FBB7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SGO1Q5FBB7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18■□□□□ 0.47
SGO1Q5FBB7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SGO1Q5FBB7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SGO1Q5FBB7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18■□□□□ 0.47
SGO1Q5FBB7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18■□□□□ 0.47
SGO1Q5FBB7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18■□□□□ 0.47
SGO1Q5FBB7 AC097488.1-201ENST00000507834 756 ntBASIC18■□□□□ 0.47
SGO1Q5FBB7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18■□□□□ 0.47
SGO1Q5FBB7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18■□□□□ 0.47
SGO1Q5FBB7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18■□□□□ 0.47
SGO1Q5FBB7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18■□□□□ 0.47
SGO1Q5FBB7 AL049637.2-201ENST00000641778 930 ntBASIC18■□□□□ 0.47
SGO1Q5FBB7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18■□□□□ 0.47
SGO1Q5FBB7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18■□□□□ 0.47
SGO1Q5FBB7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SGO1Q5FBB7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18■□□□□ 0.47
SGO1Q5FBB7 TBC1D3P2-202ENST00000577902 1649 ntBASIC18■□□□□ 0.47
SGO1Q5FBB7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
SGO1Q5FBB7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SGO1Q5FBB7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
SGO1Q5FBB7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18■□□□□ 0.47
SGO1Q5FBB7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SGO1Q5FBB7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18■□□□□ 0.47
SGO1Q5FBB7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18■□□□□ 0.47
SGO1Q5FBB7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SGO1Q5FBB7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18■□□□□ 0.47
SGO1Q5FBB7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18■□□□□ 0.47
SGO1Q5FBB7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SGO1Q5FBB7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SGO1Q5FBB7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18■□□□□ 0.47
SGO1Q5FBB7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SGO1Q5FBB7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SGO1Q5FBB7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
SGO1Q5FBB7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SGO1Q5FBB7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.99■□□□□ 0.47
SGO1Q5FBB7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SGO1Q5FBB7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SGO1Q5FBB7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SGO1Q5FBB7 AC008556.1-201ENST00000610908 2040 ntBASIC17.99■□□□□ 0.47
SGO1Q5FBB7 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.99■□□□□ 0.47
SGO1Q5FBB7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SGO1Q5FBB7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SGO1Q5FBB7 AL354751.1-201ENST00000412768 1863 ntBASIC17.99■□□□□ 0.47
SGO1Q5FBB7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
SGO1Q5FBB7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SGO1Q5FBB7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SGO1Q5FBB7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SGO1Q5FBB7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SGO1Q5FBB7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SGO1Q5FBB7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms