Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NELFEP18615 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NELFEP18615 AK4P3-201ENST00000418260 669 ntBASIC18.29■□□□□ 0.52
NELFEP18615 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NELFEP18615 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NELFEP18615 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NELFEP18615 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
NELFEP18615 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.29■□□□□ 0.52
NELFEP18615 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NELFEP18615 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NELFEP18615 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NELFEP18615 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NELFEP18615 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NELFEP18615 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NELFEP18615 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.29■□□□□ 0.52
NELFEP18615 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NELFEP18615 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NELFEP18615 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
NELFEP18615 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
NELFEP18615 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.28■□□□□ 0.52
NELFEP18615 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.28■□□□□ 0.52
NELFEP18615 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
NELFEP18615 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.28■□□□□ 0.52
NELFEP18615 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.28■□□□□ 0.52
NELFEP18615 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
NELFEP18615 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.28■□□□□ 0.52
NELFEP18615 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 AP003041.3-201ENST00000527151 707 ntBASIC18.28■□□□□ 0.52
NELFEP18615 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.28■□□□□ 0.52
NELFEP18615 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.28■□□□□ 0.52
NELFEP18615 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NELFEP18615 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NELFEP18615 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NELFEP18615 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.27■□□□□ 0.52
NELFEP18615 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NELFEP18615 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NELFEP18615 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NELFEP18615 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.27■□□□□ 0.52
NELFEP18615 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
NELFEP18615 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NELFEP18615 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NELFEP18615 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NELFEP18615 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.27■□□□□ 0.52
NELFEP18615 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.27■□□□□ 0.52
NELFEP18615 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.27■□□□□ 0.52
NELFEP18615 AC117947.1-201ENST00000427448 529 ntBASIC18.27■□□□□ 0.52
NELFEP18615 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.27■□□□□ 0.52
NELFEP18615 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.27■□□□□ 0.52
NELFEP18615 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.27■□□□□ 0.52
NELFEP18615 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.27■□□□□ 0.52
NELFEP18615 WWOX-216ENST00000569818 525 ntBASIC18.27■□□□□ 0.52
NELFEP18615 NTF6B-201ENST00000591913 560 ntBASIC18.27■□□□□ 0.52
NELFEP18615 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
NELFEP18615 AC141257.4-201ENST00000634557 245 ntBASIC18.27■□□□□ 0.52
NELFEP18615 AC136944.6-201ENST00000634818 245 ntBASIC18.27■□□□□ 0.52
NELFEP18615 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NELFEP18615 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NELFEP18615 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NELFEP18615 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NELFEP18615 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NELFEP18615 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
NELFEP18615 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NELFEP18615 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
NELFEP18615 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.27■□□□□ 0.51
NELFEP18615 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
NELFEP18615 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NELFEP18615 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.27■□□□□ 0.51
NELFEP18615 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NELFEP18615 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NELFEP18615 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NELFEP18615 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NELFEP18615 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NELFEP18615 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NELFEP18615 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.26■□□□□ 0.51
NELFEP18615 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NELFEP18615 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.26■□□□□ 0.51
NELFEP18615 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NELFEP18615 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NELFEP18615 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NELFEP18615 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NELFEP18615 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NELFEP18615 TSPY21P-201ENST00000433481 731 ntBASIC18.26■□□□□ 0.51
NELFEP18615 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NELFEP18615 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms