Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX4O95219 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNX4O95219 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX4O95219 AC068880.1-201ENST00000507289 2297 ntBASIC17.41■□□□□ 0.38
SNX4O95219 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX4O95219 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX4O95219 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNX4O95219 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX4O95219 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX4O95219 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX4O95219 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX4O95219 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX4O95219 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SNX4O95219 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SNX4O95219 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SNX4O95219 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX4O95219 AL354751.1-201ENST00000412768 1863 ntBASIC17.4■□□□□ 0.38
SNX4O95219 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX4O95219 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX4O95219 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNX4O95219 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX4O95219 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX4O95219 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX4O95219 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX4O95219 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
SNX4O95219 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.4■□□□□ 0.38
SNX4O95219 AC010653.2-201ENST00000623505 997 ntBASIC17.4■□□□□ 0.38
SNX4O95219 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX4O95219 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX4O95219 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.4■□□□□ 0.38
SNX4O95219 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX4O95219 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.4■□□□□ 0.38
SNX4O95219 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SNX4O95219 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SNX4O95219 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.39■□□□□ 0.38
SNX4O95219 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
SNX4O95219 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.38
SNX4O95219 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
SNX4O95219 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.38
SNX4O95219 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
SNX4O95219 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SNX4O95219 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX4O95219 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX4O95219 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX4O95219 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX4O95219 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX4O95219 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SNX4O95219 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SNX4O95219 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX4O95219 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX4O95219 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX4O95219 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX4O95219 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX4O95219 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX4O95219 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX4O95219 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX4O95219 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SNX4O95219 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX4O95219 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
SNX4O95219 AL023803.3-201ENST00000615559 522 ntBASIC17.39■□□□□ 0.37
SNX4O95219 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX4O95219 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX4O95219 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX4O95219 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX4O95219 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX4O95219 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.39■□□□□ 0.37
SNX4O95219 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SNX4O95219 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SNX4O95219 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX4O95219 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX4O95219 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX4O95219 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX4O95219 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
SNX4O95219 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SNX4O95219 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
SNX4O95219 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX4O95219 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SNX4O95219 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX4O95219 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.38■□□□□ 0.37
SNX4O95219 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.38■□□□□ 0.37
SNX4O95219 AL353719.1-201ENST00000566847 864 ntBASIC17.38■□□□□ 0.37
SNX4O95219 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX4O95219 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.38■□□□□ 0.37
SNX4O95219 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX4O95219 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX4O95219 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX4O95219 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX4O95219 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SNX4O95219 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SNX4O95219 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX4O95219 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SNX4O95219 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SNX4O95219 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNX4O95219 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX4O95219 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX4O95219 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX4O95219 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SNX4O95219 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX4O95219 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX4O95219 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms