Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
PRAMEF2O60811 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF2O60811 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PRAMEF2O60811 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF2O60811 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF2O60811 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.39■□□□□ 0.37
PRAMEF2O60811 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
PRAMEF2O60811 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF2O60811 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF2O60811 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF2O60811 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PRAMEF2O60811 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF2O60811 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF2O60811 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.38■□□□□ 0.37
PRAMEF2O60811 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF2O60811 MIR564-202ENST00000385049 94 ntBASIC17.38■□□□□ 0.37
PRAMEF2O60811 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF2O60811 AC009947.2-201ENST00000444014 672 ntBASIC17.38■□□□□ 0.37
PRAMEF2O60811 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.38■□□□□ 0.37
PRAMEF2O60811 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.38■□□□□ 0.37
PRAMEF2O60811 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.38■□□□□ 0.37
PRAMEF2O60811 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
PRAMEF2O60811 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEF2O60811 AL121956.5-201ENST00000625261 221 ntBASIC17.38■□□□□ 0.37
PRAMEF2O60811 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF2O60811 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF2O60811 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF2O60811 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEF2O60811 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEF2O60811 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF2O60811 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF2O60811 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF2O60811 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
PRAMEF2O60811 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF2O60811 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF2O60811 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF2O60811 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF2O60811 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF2O60811 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF2O60811 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF2O60811 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF2O60811 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF2O60811 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 BCL2-203ENST00000589955 5011 ntBASIC17.37■□□□□ 0.37
PRAMEF2O60811 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF2O60811 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 AL671277.2-201ENST00000458060 996 ntBASIC17.37■□□□□ 0.37
PRAMEF2O60811 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF2O60811 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF2O60811 CR769767.2-201ENST00000622735 460 ntBASIC17.37■□□□□ 0.37
PRAMEF2O60811 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 AP000550.4-202ENST00000639755 178 ntBASIC17.37■□□□□ 0.37
PRAMEF2O60811 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF2O60811 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF2O60811 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.37■□□□□ 0.37
PRAMEF2O60811 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF2O60811 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF2O60811 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF2O60811 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
PRAMEF2O60811 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF2O60811 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF2O60811 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF2O60811 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF2O60811 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PRAMEF2O60811 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF2O60811 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
PRAMEF2O60811 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.36■□□□□ 0.37
PRAMEF2O60811 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.36■□□□□ 0.37
PRAMEF2O60811 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.36■□□□□ 0.37
PRAMEF2O60811 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.36■□□□□ 0.37
PRAMEF2O60811 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PRAMEF2O60811 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.36■□□□□ 0.37
PRAMEF2O60811 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF2O60811 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PRAMEF2O60811 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF2O60811 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF2O60811 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PRAMEF2O60811 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF2O60811 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
PRAMEF2O60811 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF2O60811 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF2O60811 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF2O60811 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF2O60811 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
PRAMEF2O60811 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF2O60811 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms